Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.75■□□□□ 0.43
RNF31Q96EP0 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RNF31Q96EP0 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
RNF31Q96EP0 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF31Q96EP0 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF31Q96EP0 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
RNF31Q96EP0 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF31Q96EP0 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF31Q96EP0 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF31Q96EP0 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF31Q96EP0 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RNF31Q96EP0 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF31Q96EP0 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.75■□□□□ 0.43
RNF31Q96EP0 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC17.75■□□□□ 0.43
RNF31Q96EP0 KRT18P23-201ENST00000435622 1283 ntBASIC17.75■□□□□ 0.43
RNF31Q96EP0 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC17.75■□□□□ 0.43
RNF31Q96EP0 CNP-204ENST00000472031 1019 ntTSL 2 BASIC17.75■□□□□ 0.43
RNF31Q96EP0 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC17.75■□□□□ 0.43
RNF31Q96EP0 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RNF31Q96EP0 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.75■□□□□ 0.43
RNF31Q96EP0 IRF5-214ENST00000613821 595 ntTSL 5 BASIC17.75■□□□□ 0.43
RNF31Q96EP0 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RNF31Q96EP0 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF31Q96EP0 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.75■□□□□ 0.43
RNF31Q96EP0 AC093503.3-201ENST00000624917 2352 ntBASIC17.75■□□□□ 0.43
RNF31Q96EP0 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF31Q96EP0 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF31Q96EP0 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF31Q96EP0 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.75■□□□□ 0.43
RNF31Q96EP0 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
RNF31Q96EP0 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF31Q96EP0 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF31Q96EP0 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF31Q96EP0 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RNF31Q96EP0 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RNF31Q96EP0 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF31Q96EP0 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF31Q96EP0 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.74■□□□□ 0.43
RNF31Q96EP0 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RNF31Q96EP0 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF31Q96EP0 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF31Q96EP0 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF31Q96EP0 AC007613.1-201ENST00000572811 2597 ntBASIC17.74■□□□□ 0.43
RNF31Q96EP0 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF31Q96EP0 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF31Q96EP0 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RNF31Q96EP0 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF31Q96EP0 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC17.74■□□□□ 0.43
RNF31Q96EP0 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC17.74■□□□□ 0.43
RNF31Q96EP0 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
RNF31Q96EP0 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.74■□□□□ 0.43
RNF31Q96EP0 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.74■□□□□ 0.43
RNF31Q96EP0 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.74■□□□□ 0.43
RNF31Q96EP0 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.74■□□□□ 0.43
RNF31Q96EP0 AC005332.8-201ENST00000622750 2735 ntBASIC17.74■□□□□ 0.43
RNF31Q96EP0 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
RNF31Q96EP0 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.74■□□□□ 0.43
RNF31Q96EP0 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RNF31Q96EP0 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF31Q96EP0 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF31Q96EP0 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF31Q96EP0 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.73■□□□□ 0.43
RNF31Q96EP0 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC17.73■□□□□ 0.43
RNF31Q96EP0 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
RNF31Q96EP0 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.73■□□□□ 0.43
RNF31Q96EP0 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF31Q96EP0 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF31Q96EP0 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.73■□□□□ 0.43
RNF31Q96EP0 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF31Q96EP0 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF31Q96EP0 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
RNF31Q96EP0 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.73■□□□□ 0.43
RNF31Q96EP0 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF31Q96EP0 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
RNF31Q96EP0 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC17.73■□□□□ 0.43
RNF31Q96EP0 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC17.73■□□□□ 0.43
RNF31Q96EP0 AC034232.1-201ENST00000506026 1064 ntBASIC17.73■□□□□ 0.43
RNF31Q96EP0 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF31Q96EP0 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.73■□□□□ 0.43
RNF31Q96EP0 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF31Q96EP0 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF31Q96EP0 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF31Q96EP0 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.73■□□□□ 0.43
RNF31Q96EP0 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF31Q96EP0 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RNF31Q96EP0 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.73■□□□□ 0.43
RNF31Q96EP0 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF31Q96EP0 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
RNF31Q96EP0 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF31Q96EP0 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RNF31Q96EP0 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF31Q96EP0 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
RNF31Q96EP0 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.73■□□□□ 0.43
RNF31Q96EP0 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RNF31Q96EP0 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
RNF31Q96EP0 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
RNF31Q96EP0 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF31Q96EP0 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.73■□□□□ 0.43
RNF31Q96EP0 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RNF31Q96EP0 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms