Protein–RNA interactions for Protein: Q969V3

NCLN, Nicalin, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLNQ969V3 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NCLNQ969V3 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
NCLNQ969V3 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
NCLNQ969V3 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
NCLNQ969V3 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NCLNQ969V3 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NCLNQ969V3 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
NCLNQ969V3 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
NCLNQ969V3 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.88■□□□□ 0.45
NCLNQ969V3 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NCLNQ969V3 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
NCLNQ969V3 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NCLNQ969V3 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.88■□□□□ 0.45
NCLNQ969V3 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NCLNQ969V3 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NCLNQ969V3 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NCLNQ969V3 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.88■□□□□ 0.45
NCLNQ969V3 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
NCLNQ969V3 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
NCLNQ969V3 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NCLNQ969V3 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.88■□□□□ 0.45
NCLNQ969V3 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC17.88■□□□□ 0.45
NCLNQ969V3 FITM1-202ENST00000559294 800 ntBASIC17.88■□□□□ 0.45
NCLNQ969V3 SLC25A1P4-201ENST00000567977 778 ntBASIC17.88■□□□□ 0.45
NCLNQ969V3 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.88■□□□□ 0.45
NCLNQ969V3 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
NCLNQ969V3 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.88■□□□□ 0.45
NCLNQ969V3 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
NCLNQ969V3 NOC2LP1-202ENST00000452600 2235 ntBASIC17.88■□□□□ 0.45
NCLNQ969V3 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.88■□□□□ 0.45
NCLNQ969V3 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
NCLNQ969V3 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NCLNQ969V3 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NCLNQ969V3 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NCLNQ969V3 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NCLNQ969V3 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.88■□□□□ 0.45
NCLNQ969V3 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NCLNQ969V3 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NCLNQ969V3 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NCLNQ969V3 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
NCLNQ969V3 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
NCLNQ969V3 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NCLNQ969V3 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NCLNQ969V3 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.87■□□□□ 0.45
NCLNQ969V3 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
NCLNQ969V3 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
NCLNQ969V3 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.87■□□□□ 0.45
NCLNQ969V3 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NCLNQ969V3 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NCLNQ969V3 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NCLNQ969V3 CRYGFP-201ENST00000418459 633 ntBASIC17.87■□□□□ 0.45
NCLNQ969V3 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NCLNQ969V3 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.87■□□□□ 0.45
NCLNQ969V3 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.87■□□□□ 0.45
NCLNQ969V3 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC17.87■□□□□ 0.45
NCLNQ969V3 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC17.87■□□□□ 0.45
NCLNQ969V3 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.87■□□□□ 0.45
NCLNQ969V3 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.87■□□□□ 0.45
NCLNQ969V3 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
NCLNQ969V3 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
NCLNQ969V3 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.87■□□□□ 0.45
NCLNQ969V3 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.87■□□□□ 0.45
NCLNQ969V3 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.87■□□□□ 0.45
NCLNQ969V3 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NCLNQ969V3 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
NCLNQ969V3 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
NCLNQ969V3 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
NCLNQ969V3 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NCLNQ969V3 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NCLNQ969V3 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
NCLNQ969V3 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
NCLNQ969V3 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
NCLNQ969V3 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NCLNQ969V3 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.86■□□□□ 0.45
NCLNQ969V3 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.86■□□□□ 0.45
NCLNQ969V3 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
NCLNQ969V3 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NCLNQ969V3 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NCLNQ969V3 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.86■□□□□ 0.45
NCLNQ969V3 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
NCLNQ969V3 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
NCLNQ969V3 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
NCLNQ969V3 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NCLNQ969V3 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NCLNQ969V3 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NCLNQ969V3 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NCLNQ969V3 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.86■□□□□ 0.45
NCLNQ969V3 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.86■□□□□ 0.45
NCLNQ969V3 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.86■□□□□ 0.45
NCLNQ969V3 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NCLNQ969V3 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
NCLNQ969V3 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
NCLNQ969V3 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
NCLNQ969V3 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC17.86■□□□□ 0.45
NCLNQ969V3 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.86■□□□□ 0.45
NCLNQ969V3 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.86■□□□□ 0.45
NCLNQ969V3 KRT8P9-201ENST00000558927 1449 ntBASIC17.86■□□□□ 0.45
NCLNQ969V3 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.86■□□□□ 0.45
NCLNQ969V3 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.86■□□□□ 0.45
NCLNQ969V3 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms