Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC30.73■■■□□ 2.51
TOPBP1Q92547 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC30.73■■■□□ 2.51
TOPBP1Q92547 CALY-203ENST00000368558 825 ntTSL 5 BASIC30.73■■■□□ 2.51
TOPBP1Q92547 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC30.73■■■□□ 2.51
TOPBP1Q92547 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
TOPBP1Q92547 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC30.72■■■□□ 2.51
TOPBP1Q92547 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC30.72■■■□□ 2.51
TOPBP1Q92547 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
TOPBP1Q92547 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC30.72■■■□□ 2.51
TOPBP1Q92547 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC30.72■■■□□ 2.51
TOPBP1Q92547 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC30.72■■■□□ 2.51
TOPBP1Q92547 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC30.72■■■□□ 2.51
TOPBP1Q92547 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC30.72■■■□□ 2.51
TOPBP1Q92547 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
TOPBP1Q92547 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC30.72■■■□□ 2.51
TOPBP1Q92547 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC30.72■■■□□ 2.51
TOPBP1Q92547 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC30.72■■■□□ 2.51
TOPBP1Q92547 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC30.72■■■□□ 2.51
TOPBP1Q92547 AC125437.2-201ENST00000625180 2167 ntBASIC30.72■■■□□ 2.51
TOPBP1Q92547 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC30.71■■■□□ 2.51
TOPBP1Q92547 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC30.71■■■□□ 2.51
TOPBP1Q92547 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC30.71■■■□□ 2.51
TOPBP1Q92547 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
TOPBP1Q92547 AC254562.1-201ENST00000417586 456 ntBASIC30.71■■■□□ 2.51
TOPBP1Q92547 KRT18P2-201ENST00000447938 1258 ntBASIC30.71■■■□□ 2.51
TOPBP1Q92547 AC108751.1-201ENST00000490852 363 ntBASIC30.71■■■□□ 2.51
TOPBP1Q92547 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC30.71■■■□□ 2.51
TOPBP1Q92547 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC30.71■■■□□ 2.51
TOPBP1Q92547 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC30.71■■■□□ 2.51
TOPBP1Q92547 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
TOPBP1Q92547 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC30.71■■■□□ 2.51
TOPBP1Q92547 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
TOPBP1Q92547 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC30.71■■■□□ 2.51
TOPBP1Q92547 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC30.71■■■□□ 2.51
TOPBP1Q92547 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
TOPBP1Q92547 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC30.7■■■□□ 2.51
TOPBP1Q92547 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC30.7■■■□□ 2.51
TOPBP1Q92547 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC30.7■■■□□ 2.51
TOPBP1Q92547 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC30.7■■■□□ 2.51
TOPBP1Q92547 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC30.7■■■□□ 2.51
TOPBP1Q92547 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
TOPBP1Q92547 AC112907.3-201ENST00000577781 2400 ntBASIC30.7■■■□□ 2.51
TOPBP1Q92547 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC30.7■■■□□ 2.51
TOPBP1Q92547 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC30.7■■■□□ 2.51
TOPBP1Q92547 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC30.7■■■□□ 2.51
TOPBP1Q92547 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC30.7■■■□□ 2.51
TOPBP1Q92547 AC002310.6-201ENST00000624451 1377 ntBASIC30.7■■■□□ 2.51
TOPBP1Q92547 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC30.7■■■□□ 2.51
TOPBP1Q92547 AC079776.2-201ENST00000641154 1609 ntBASIC30.7■■■□□ 2.51
TOPBP1Q92547 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC30.7■■■□□ 2.5
TOPBP1Q92547 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC30.7■■■□□ 2.5
TOPBP1Q92547 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
TOPBP1Q92547 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
TOPBP1Q92547 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
TOPBP1Q92547 CFL1-202ENST00000524553 860 ntTSL 2 BASIC30.69■■■□□ 2.5
TOPBP1Q92547 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC30.69■■■□□ 2.5
TOPBP1Q92547 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC30.69■■■□□ 2.5
TOPBP1Q92547 AC073592.4-201ENST00000623827 446 ntBASIC30.69■■■□□ 2.5
TOPBP1Q92547 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
TOPBP1Q92547 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC30.69■■■□□ 2.5
TOPBP1Q92547 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC30.69■■■□□ 2.5
TOPBP1Q92547 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
TOPBP1Q92547 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC30.69■■■□□ 2.5
TOPBP1Q92547 SDHAP2-201ENST00000455183 2001 ntBASIC30.68■■■□□ 2.5
TOPBP1Q92547 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC30.68■■■□□ 2.5
TOPBP1Q92547 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC30.68■■■□□ 2.5
TOPBP1Q92547 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC30.68■■■□□ 2.5
TOPBP1Q92547 HTR5BP-201ENST00000430851 1154 ntBASIC30.68■■■□□ 2.5
TOPBP1Q92547 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC30.68■■■□□ 2.5
TOPBP1Q92547 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC30.68■■■□□ 2.5
TOPBP1Q92547 SDCCAG3P1-201ENST00000589292 1150 ntBASIC30.68■■■□□ 2.5
TOPBP1Q92547 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC30.68■■■□□ 2.5
TOPBP1Q92547 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC30.68■■■□□ 2.5
TOPBP1Q92547 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC30.68■■■□□ 2.5
TOPBP1Q92547 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
TOPBP1Q92547 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
TOPBP1Q92547 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC30.68■■■□□ 2.5
TOPBP1Q92547 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
TOPBP1Q92547 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
TOPBP1Q92547 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
TOPBP1Q92547 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
TOPBP1Q92547 AL035633.1-201ENST00000406139 838 ntBASIC30.68■■■□□ 2.5
TOPBP1Q92547 PON3-203ENST00000427422 894 ntTSL 3 BASIC30.68■■■□□ 2.5
TOPBP1Q92547 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC30.68■■■□□ 2.5
TOPBP1Q92547 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC30.68■■■□□ 2.5
TOPBP1Q92547 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC30.68■■■□□ 2.5
TOPBP1Q92547 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
TOPBP1Q92547 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
TOPBP1Q92547 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
TOPBP1Q92547 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
TOPBP1Q92547 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
TOPBP1Q92547 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
TOPBP1Q92547 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC30.67■■■□□ 2.5
TOPBP1Q92547 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC30.67■■■□□ 2.5
TOPBP1Q92547 ORC5-208ENST00000626700 344 ntTSL 3 BASIC30.67■■■□□ 2.5
TOPBP1Q92547 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC30.67■■■□□ 2.5
TOPBP1Q92547 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC30.67■■■□□ 2.5
TOPBP1Q92547 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC30.67■■■□□ 2.5
TOPBP1Q92547 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC30.66■■■□□ 2.5
TOPBP1Q92547 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms