Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CLDND2Q8NHS1 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC15.66■□□□□ 0.1
CLDND2Q8NHS1 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLDND2Q8NHS1 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC15.66■□□□□ 0.1
CLDND2Q8NHS1 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC15.66■□□□□ 0.1
CLDND2Q8NHS1 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CLDND2Q8NHS1 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CLDND2Q8NHS1 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CLDND2Q8NHS1 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLDND2Q8NHS1 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CLDND2Q8NHS1 FZD10-202ENST00000539839 3282 ntBASIC15.65■□□□□ 0.1
CLDND2Q8NHS1 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
CLDND2Q8NHS1 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLDND2Q8NHS1 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC15.65■□□□□ 0.1
CLDND2Q8NHS1 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLDND2Q8NHS1 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLDND2Q8NHS1 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC15.65■□□□□ 0.1
CLDND2Q8NHS1 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CLDND2Q8NHS1 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLDND2Q8NHS1 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CLDND2Q8NHS1 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLDND2Q8NHS1 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
CLDND2Q8NHS1 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC15.65■□□□□ 0.1
CLDND2Q8NHS1 TEX21P-204ENST00000641479 1693 ntBASIC15.65■□□□□ 0.1
CLDND2Q8NHS1 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLDND2Q8NHS1 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLDND2Q8NHS1 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CLDND2Q8NHS1 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
CLDND2Q8NHS1 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC15.65■□□□□ 0.1
CLDND2Q8NHS1 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CLDND2Q8NHS1 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CLDND2Q8NHS1 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC15.65■□□□□ 0.1
CLDND2Q8NHS1 AC034232.1-201ENST00000506026 1064 ntBASIC15.65■□□□□ 0.1
CLDND2Q8NHS1 PTK2-216ENST00000519881 863 ntTSL 3 BASIC15.65■□□□□ 0.1
CLDND2Q8NHS1 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLDND2Q8NHS1 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC15.65■□□□□ 0.1
CLDND2Q8NHS1 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC15.65■□□□□ 0.1
CLDND2Q8NHS1 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CLDND2Q8NHS1 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
CLDND2Q8NHS1 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.1
CLDND2Q8NHS1 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLDND2Q8NHS1 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLDND2Q8NHS1 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
CLDND2Q8NHS1 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLDND2Q8NHS1 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CLDND2Q8NHS1 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC15.65■□□□□ 0.1
CLDND2Q8NHS1 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
CLDND2Q8NHS1 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC15.65■□□□□ 0.1
CLDND2Q8NHS1 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLDND2Q8NHS1 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLDND2Q8NHS1 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.1
CLDND2Q8NHS1 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
CLDND2Q8NHS1 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLDND2Q8NHS1 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLDND2Q8NHS1 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
CLDND2Q8NHS1 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC15.64■□□□□ 0.09
CLDND2Q8NHS1 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
CLDND2Q8NHS1 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CLDND2Q8NHS1 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLDND2Q8NHS1 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CLDND2Q8NHS1 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLDND2Q8NHS1 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLDND2Q8NHS1 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CLDND2Q8NHS1 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CLDND2Q8NHS1 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC15.64■□□□□ 0.09
CLDND2Q8NHS1 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC15.64■□□□□ 0.09
CLDND2Q8NHS1 RASA4DP-201ENST00000460726 1199 ntBASIC15.64■□□□□ 0.09
CLDND2Q8NHS1 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLDND2Q8NHS1 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC15.64■□□□□ 0.09
CLDND2Q8NHS1 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC15.64■□□□□ 0.09
CLDND2Q8NHS1 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC15.64■□□□□ 0.09
CLDND2Q8NHS1 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC15.64■□□□□ 0.09
CLDND2Q8NHS1 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC15.64■□□□□ 0.09
CLDND2Q8NHS1 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC15.64■□□□□ 0.09
CLDND2Q8NHS1 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC15.64■□□□□ 0.09
CLDND2Q8NHS1 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLDND2Q8NHS1 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CLDND2Q8NHS1 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLDND2Q8NHS1 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
CLDND2Q8NHS1 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLDND2Q8NHS1 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLDND2Q8NHS1 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC15.64■□□□□ 0.09
CLDND2Q8NHS1 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC15.63■□□□□ 0.09
CLDND2Q8NHS1 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC15.63■□□□□ 0.09
CLDND2Q8NHS1 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CLDND2Q8NHS1 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CLDND2Q8NHS1 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
CLDND2Q8NHS1 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CLDND2Q8NHS1 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CLDND2Q8NHS1 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CLDND2Q8NHS1 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CLDND2Q8NHS1 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC15.63■□□□□ 0.09
CLDND2Q8NHS1 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CLDND2Q8NHS1 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
CLDND2Q8NHS1 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
CLDND2Q8NHS1 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CLDND2Q8NHS1 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC15.63■□□□□ 0.09
CLDND2Q8NHS1 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CLDND2Q8NHS1 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CLDND2Q8NHS1 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms