Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SIMC1Q8NDZ2 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.35■□□□□ 0.37
SIMC1Q8NDZ2 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SIMC1Q8NDZ2 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SIMC1Q8NDZ2 AL390961.4-201ENST00000623958 2535 ntBASIC17.35■□□□□ 0.37
SIMC1Q8NDZ2 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SIMC1Q8NDZ2 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
SIMC1Q8NDZ2 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SIMC1Q8NDZ2 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SIMC1Q8NDZ2 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC17.34■□□□□ 0.37
SIMC1Q8NDZ2 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SIMC1Q8NDZ2 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
SIMC1Q8NDZ2 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SIMC1Q8NDZ2 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
SIMC1Q8NDZ2 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.34■□□□□ 0.37
SIMC1Q8NDZ2 SLC25A3P1-201ENST00000443844 931 ntBASIC17.34■□□□□ 0.37
SIMC1Q8NDZ2 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.34■□□□□ 0.37
SIMC1Q8NDZ2 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SIMC1Q8NDZ2 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.34■□□□□ 0.37
SIMC1Q8NDZ2 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SIMC1Q8NDZ2 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.34■□□□□ 0.37
SIMC1Q8NDZ2 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
SIMC1Q8NDZ2 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SIMC1Q8NDZ2 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.34■□□□□ 0.37
SIMC1Q8NDZ2 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
SIMC1Q8NDZ2 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SIMC1Q8NDZ2 AC090164.3-201ENST00000610780 2143 ntBASIC17.33■□□□□ 0.37
SIMC1Q8NDZ2 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
SIMC1Q8NDZ2 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.33■□□□□ 0.37
SIMC1Q8NDZ2 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.33■□□□□ 0.37
SIMC1Q8NDZ2 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SIMC1Q8NDZ2 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SIMC1Q8NDZ2 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.37
SIMC1Q8NDZ2 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC17.33■□□□□ 0.37
SIMC1Q8NDZ2 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
SIMC1Q8NDZ2 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SIMC1Q8NDZ2 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.33■□□□□ 0.37
SIMC1Q8NDZ2 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC17.33■□□□□ 0.37
SIMC1Q8NDZ2 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SIMC1Q8NDZ2 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SIMC1Q8NDZ2 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SIMC1Q8NDZ2 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SIMC1Q8NDZ2 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC17.33■□□□□ 0.36
SIMC1Q8NDZ2 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SIMC1Q8NDZ2 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SIMC1Q8NDZ2 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SIMC1Q8NDZ2 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
SIMC1Q8NDZ2 WWOX-216ENST00000569818 525 ntBASIC17.33■□□□□ 0.36
SIMC1Q8NDZ2 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.33■□□□□ 0.36
SIMC1Q8NDZ2 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.33■□□□□ 0.36
SIMC1Q8NDZ2 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC17.33■□□□□ 0.36
SIMC1Q8NDZ2 CLN6-221ENST00000637494 765 ntTSL 5 BASIC17.33■□□□□ 0.36
SIMC1Q8NDZ2 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SIMC1Q8NDZ2 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SIMC1Q8NDZ2 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
SIMC1Q8NDZ2 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SIMC1Q8NDZ2 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SIMC1Q8NDZ2 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.33■□□□□ 0.36
SIMC1Q8NDZ2 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
SIMC1Q8NDZ2 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
SIMC1Q8NDZ2 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SIMC1Q8NDZ2 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.32■□□□□ 0.36
SIMC1Q8NDZ2 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SIMC1Q8NDZ2 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SIMC1Q8NDZ2 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SIMC1Q8NDZ2 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
SIMC1Q8NDZ2 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SIMC1Q8NDZ2 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SIMC1Q8NDZ2 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SIMC1Q8NDZ2 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SIMC1Q8NDZ2 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SIMC1Q8NDZ2 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
SIMC1Q8NDZ2 KRT8P50-201ENST00000562022 1438 ntBASIC17.32■□□□□ 0.36
SIMC1Q8NDZ2 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.32■□□□□ 0.36
SIMC1Q8NDZ2 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SIMC1Q8NDZ2 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.32■□□□□ 0.36
SIMC1Q8NDZ2 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SIMC1Q8NDZ2 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SIMC1Q8NDZ2 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SIMC1Q8NDZ2 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
SIMC1Q8NDZ2 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SIMC1Q8NDZ2 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.32■□□□□ 0.36
SIMC1Q8NDZ2 HMGA1P5-201ENST00000412453 271 ntBASIC17.32■□□□□ 0.36
SIMC1Q8NDZ2 AC009947.2-201ENST00000444014 672 ntBASIC17.32■□□□□ 0.36
SIMC1Q8NDZ2 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.32■□□□□ 0.36
SIMC1Q8NDZ2 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SIMC1Q8NDZ2 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SIMC1Q8NDZ2 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SIMC1Q8NDZ2 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SIMC1Q8NDZ2 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SIMC1Q8NDZ2 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
SIMC1Q8NDZ2 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SIMC1Q8NDZ2 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.32■□□□□ 0.36
SIMC1Q8NDZ2 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.32■□□□□ 0.36
SIMC1Q8NDZ2 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SIMC1Q8NDZ2 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SIMC1Q8NDZ2 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SIMC1Q8NDZ2 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.31■□□□□ 0.36
SIMC1Q8NDZ2 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.31■□□□□ 0.36
SIMC1Q8NDZ2 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms