Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDH20Q8N6Y1 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PCDH20Q8N6Y1 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDH20Q8N6Y1 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDH20Q8N6Y1 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
PCDH20Q8N6Y1 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PCDH20Q8N6Y1 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PCDH20Q8N6Y1 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PCDH20Q8N6Y1 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.81■□□□□ 0.6
PCDH20Q8N6Y1 CROCCP3-202ENST00000420820 1947 ntBASIC18.81■□□□□ 0.6
PCDH20Q8N6Y1 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC18.81■□□□□ 0.6
PCDH20Q8N6Y1 AP000593.1-201ENST00000393668 712 ntBASIC18.81■□□□□ 0.6
PCDH20Q8N6Y1 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC18.81■□□□□ 0.6
PCDH20Q8N6Y1 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
PCDH20Q8N6Y1 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.81■□□□□ 0.6
PCDH20Q8N6Y1 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.81■□□□□ 0.6
PCDH20Q8N6Y1 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
PCDH20Q8N6Y1 DFFB-212ENST00000625756 649 ntTSL 5 BASIC18.81■□□□□ 0.6
PCDH20Q8N6Y1 AL157888.1-201ENST00000631930 593 ntBASIC18.81■□□□□ 0.6
PCDH20Q8N6Y1 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDH20Q8N6Y1 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDH20Q8N6Y1 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDH20Q8N6Y1 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PCDH20Q8N6Y1 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PCDH20Q8N6Y1 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.81■□□□□ 0.6
PCDH20Q8N6Y1 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PCDH20Q8N6Y1 LINC01311-201ENST00000565162 1445 ntBASIC18.81■□□□□ 0.6
PCDH20Q8N6Y1 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
PCDH20Q8N6Y1 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
PCDH20Q8N6Y1 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
PCDH20Q8N6Y1 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.8■□□□□ 0.6
PCDH20Q8N6Y1 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
PCDH20Q8N6Y1 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDH20Q8N6Y1 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDH20Q8N6Y1 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
PCDH20Q8N6Y1 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
PCDH20Q8N6Y1 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC18.8■□□□□ 0.6
PCDH20Q8N6Y1 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
PCDH20Q8N6Y1 AC104581.1-202ENST00000635932 2618 ntBASIC18.8■□□□□ 0.6
PCDH20Q8N6Y1 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.8■□□□□ 0.6
PCDH20Q8N6Y1 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PCDH20Q8N6Y1 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PCDH20Q8N6Y1 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDH20Q8N6Y1 ISCU-203ENST00000431221 799 ntTSL 2 BASIC18.8■□□□□ 0.6
PCDH20Q8N6Y1 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.8■□□□□ 0.6
PCDH20Q8N6Y1 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDH20Q8N6Y1 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDH20Q8N6Y1 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
PCDH20Q8N6Y1 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDH20Q8N6Y1 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDH20Q8N6Y1 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDH20Q8N6Y1 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.8■□□□□ 0.6
PCDH20Q8N6Y1 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
PCDH20Q8N6Y1 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.8■□□□□ 0.6
PCDH20Q8N6Y1 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PCDH20Q8N6Y1 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.8■□□□□ 0.6
PCDH20Q8N6Y1 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDH20Q8N6Y1 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
PCDH20Q8N6Y1 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDH20Q8N6Y1 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDH20Q8N6Y1 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.79■□□□□ 0.6
PCDH20Q8N6Y1 LETM1P2-201ENST00000597330 2178 ntBASIC18.79■□□□□ 0.6
PCDH20Q8N6Y1 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDH20Q8N6Y1 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDH20Q8N6Y1 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
PCDH20Q8N6Y1 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDH20Q8N6Y1 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PCDH20Q8N6Y1 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PCDH20Q8N6Y1 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDH20Q8N6Y1 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDH20Q8N6Y1 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PCDH20Q8N6Y1 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.79■□□□□ 0.6
PCDH20Q8N6Y1 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
PCDH20Q8N6Y1 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDH20Q8N6Y1 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.79■□□□□ 0.6
PCDH20Q8N6Y1 AC009065.1-201ENST00000564055 1225 ntBASIC18.79■□□□□ 0.6
PCDH20Q8N6Y1 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.79■□□□□ 0.6
PCDH20Q8N6Y1 DBP-204ENST00000599385 709 ntTSL 3 BASIC18.79■□□□□ 0.6
PCDH20Q8N6Y1 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC18.79■□□□□ 0.6
PCDH20Q8N6Y1 AC083849.1-201ENST00000615227 514 ntBASIC18.79■□□□□ 0.6
PCDH20Q8N6Y1 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.79■□□□□ 0.6
PCDH20Q8N6Y1 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDH20Q8N6Y1 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDH20Q8N6Y1 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.79■□□□□ 0.6
PCDH20Q8N6Y1 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDH20Q8N6Y1 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
PCDH20Q8N6Y1 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDH20Q8N6Y1 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDH20Q8N6Y1 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.79■□□□□ 0.6
PCDH20Q8N6Y1 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDH20Q8N6Y1 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.78■□□□□ 0.6
PCDH20Q8N6Y1 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDH20Q8N6Y1 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDH20Q8N6Y1 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDH20Q8N6Y1 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.78■□□□□ 0.6
PCDH20Q8N6Y1 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
PCDH20Q8N6Y1 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDH20Q8N6Y1 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDH20Q8N6Y1 KRT8P50-201ENST00000562022 1438 ntBASIC18.78■□□□□ 0.6
PCDH20Q8N6Y1 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms