Protein–RNA interactions for Protein: Q8N5Y2

MSL3, Male-specific lethal 3 homolog, humanhuman

Known RBP Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3Q8N5Y2 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC20.99■□□□□ 0.95
MSL3Q8N5Y2 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
MSL3Q8N5Y2 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
MSL3Q8N5Y2 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC20.99■□□□□ 0.95
MSL3Q8N5Y2 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
MSL3Q8N5Y2 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC20.99■□□□□ 0.95
MSL3Q8N5Y2 AC009078.2-202ENST00000463353 338 ntBASIC20.99■□□□□ 0.95
MSL3Q8N5Y2 RN7SL606P-201ENST00000472779 293 ntBASIC20.99■□□□□ 0.95
MSL3Q8N5Y2 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC20.99■□□□□ 0.95
MSL3Q8N5Y2 PPOX-214ENST00000535223 664 ntTSL 3 BASIC20.99■□□□□ 0.95
MSL3Q8N5Y2 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC20.99■□□□□ 0.95
MSL3Q8N5Y2 BMF-207ENST00000559701 630 ntTSL 3 BASIC20.99■□□□□ 0.95
MSL3Q8N5Y2 AC074051.2-201ENST00000565115 352 ntBASIC20.99■□□□□ 0.95
MSL3Q8N5Y2 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC20.99■□□□□ 0.95
MSL3Q8N5Y2 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC20.99■□□□□ 0.95
MSL3Q8N5Y2 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
MSL3Q8N5Y2 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
MSL3Q8N5Y2 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
MSL3Q8N5Y2 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
MSL3Q8N5Y2 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
MSL3Q8N5Y2 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
MSL3Q8N5Y2 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
MSL3Q8N5Y2 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC20.99■□□□□ 0.95
MSL3Q8N5Y2 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC20.99■□□□□ 0.95
MSL3Q8N5Y2 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC20.99■□□□□ 0.95
MSL3Q8N5Y2 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC20.98■□□□□ 0.95
MSL3Q8N5Y2 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
MSL3Q8N5Y2 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
MSL3Q8N5Y2 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
MSL3Q8N5Y2 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
MSL3Q8N5Y2 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
MSL3Q8N5Y2 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
MSL3Q8N5Y2 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
MSL3Q8N5Y2 PTGES2-AS1-201ENST00000443493 2100 ntBASIC20.98■□□□□ 0.95
MSL3Q8N5Y2 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
MSL3Q8N5Y2 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
MSL3Q8N5Y2 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
MSL3Q8N5Y2 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
MSL3Q8N5Y2 IGHV3-47-201ENST00000425060 335 ntBASIC20.98■□□□□ 0.95
MSL3Q8N5Y2 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
MSL3Q8N5Y2 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC20.98■□□□□ 0.95
MSL3Q8N5Y2 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
MSL3Q8N5Y2 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC20.98■□□□□ 0.95
MSL3Q8N5Y2 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC20.98■□□□□ 0.95
MSL3Q8N5Y2 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC20.98■□□□□ 0.95
MSL3Q8N5Y2 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
MSL3Q8N5Y2 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
MSL3Q8N5Y2 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
MSL3Q8N5Y2 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
MSL3Q8N5Y2 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
MSL3Q8N5Y2 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
MSL3Q8N5Y2 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
MSL3Q8N5Y2 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
MSL3Q8N5Y2 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
MSL3Q8N5Y2 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC20.97■□□□□ 0.95
MSL3Q8N5Y2 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
MSL3Q8N5Y2 PODN-203ENST00000395871 2744 ntTSL 5 BASIC20.97■□□□□ 0.95
MSL3Q8N5Y2 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
MSL3Q8N5Y2 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC20.97■□□□□ 0.95
MSL3Q8N5Y2 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC20.97■□□□□ 0.95
MSL3Q8N5Y2 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
MSL3Q8N5Y2 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC20.97■□□□□ 0.95
MSL3Q8N5Y2 AL592071.1-201ENST00000611956 408 ntBASIC20.97■□□□□ 0.95
MSL3Q8N5Y2 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
MSL3Q8N5Y2 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
MSL3Q8N5Y2 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
MSL3Q8N5Y2 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
MSL3Q8N5Y2 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC20.97■□□□□ 0.95
MSL3Q8N5Y2 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
MSL3Q8N5Y2 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
MSL3Q8N5Y2 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC20.96■□□□□ 0.95
MSL3Q8N5Y2 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
MSL3Q8N5Y2 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
MSL3Q8N5Y2 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
MSL3Q8N5Y2 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
MSL3Q8N5Y2 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC20.96■□□□□ 0.95
MSL3Q8N5Y2 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC20.96■□□□□ 0.95
MSL3Q8N5Y2 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC20.96■□□□□ 0.95
MSL3Q8N5Y2 VENTXP7-201ENST00000475503 772 ntBASIC20.96■□□□□ 0.95
MSL3Q8N5Y2 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC20.96■□□□□ 0.95
MSL3Q8N5Y2 AL662844.1-201ENST00000546340 181 ntBASIC20.96■□□□□ 0.95
MSL3Q8N5Y2 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC20.96■□□□□ 0.95
MSL3Q8N5Y2 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC20.96■□□□□ 0.95
MSL3Q8N5Y2 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
MSL3Q8N5Y2 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
MSL3Q8N5Y2 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
MSL3Q8N5Y2 AC141586.3-201ENST00000562166 1838 ntBASIC20.96■□□□□ 0.95
MSL3Q8N5Y2 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
MSL3Q8N5Y2 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
MSL3Q8N5Y2 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
MSL3Q8N5Y2 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC20.96■□□□□ 0.95
MSL3Q8N5Y2 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
MSL3Q8N5Y2 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
MSL3Q8N5Y2 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
MSL3Q8N5Y2 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
MSL3Q8N5Y2 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.96■□□□□ 0.95
MSL3Q8N5Y2 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
MSL3Q8N5Y2 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
MSL3Q8N5Y2 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
MSL3Q8N5Y2 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms