Protein–RNA interactions for Protein: Q8N5G0

SMIM20, Small integral membrane protein 20, humanhuman

Predictions only

Length 67 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM20Q8N5G0 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SMIM20Q8N5G0 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC11.48□□□□□ -0.57
SMIM20Q8N5G0 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
SMIM20Q8N5G0 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC11.48□□□□□ -0.57
SMIM20Q8N5G0 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
SMIM20Q8N5G0 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
SMIM20Q8N5G0 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC11.48□□□□□ -0.57
SMIM20Q8N5G0 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SMIM20Q8N5G0 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC11.48□□□□□ -0.57
SMIM20Q8N5G0 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
SMIM20Q8N5G0 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
SMIM20Q8N5G0 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SMIM20Q8N5G0 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SMIM20Q8N5G0 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SMIM20Q8N5G0 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
SMIM20Q8N5G0 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SMIM20Q8N5G0 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
SMIM20Q8N5G0 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
SMIM20Q8N5G0 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC11.48□□□□□ -0.57
SMIM20Q8N5G0 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
SMIM20Q8N5G0 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC11.48□□□□□ -0.57
SMIM20Q8N5G0 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
SMIM20Q8N5G0 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
SMIM20Q8N5G0 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
SMIM20Q8N5G0 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
SMIM20Q8N5G0 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SMIM20Q8N5G0 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC11.48□□□□□ -0.57
SMIM20Q8N5G0 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
SMIM20Q8N5G0 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SMIM20Q8N5G0 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
SMIM20Q8N5G0 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SMIM20Q8N5G0 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
SMIM20Q8N5G0 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SMIM20Q8N5G0 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
SMIM20Q8N5G0 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC11.48□□□□□ -0.57
SMIM20Q8N5G0 AC134043.2-201ENST00000624206 2238 ntBASIC11.48□□□□□ -0.57
SMIM20Q8N5G0 PPCDC-201ENST00000342932 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SMIM20Q8N5G0 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
SMIM20Q8N5G0 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
SMIM20Q8N5G0 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
SMIM20Q8N5G0 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
SMIM20Q8N5G0 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SMIM20Q8N5G0 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
SMIM20Q8N5G0 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SMIM20Q8N5G0 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SMIM20Q8N5G0 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SMIM20Q8N5G0 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
SMIM20Q8N5G0 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC11.47□□□□□ -0.57
SMIM20Q8N5G0 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
SMIM20Q8N5G0 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
SMIM20Q8N5G0 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC11.47□□□□□ -0.57
SMIM20Q8N5G0 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
SMIM20Q8N5G0 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SMIM20Q8N5G0 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SMIM20Q8N5G0 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SMIM20Q8N5G0 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SMIM20Q8N5G0 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SMIM20Q8N5G0 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC11.47□□□□□ -0.57
SMIM20Q8N5G0 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC11.47□□□□□ -0.57
SMIM20Q8N5G0 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC11.47□□□□□ -0.57
SMIM20Q8N5G0 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
SMIM20Q8N5G0 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SMIM20Q8N5G0 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SMIM20Q8N5G0 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SMIM20Q8N5G0 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
SMIM20Q8N5G0 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
SMIM20Q8N5G0 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SMIM20Q8N5G0 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC11.47□□□□□ -0.57
SMIM20Q8N5G0 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
SMIM20Q8N5G0 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC11.47□□□□□ -0.57
SMIM20Q8N5G0 AL162741.1-201ENST00000565563 1558 ntBASIC11.47□□□□□ -0.57
SMIM20Q8N5G0 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
SMIM20Q8N5G0 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SMIM20Q8N5G0 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SMIM20Q8N5G0 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SMIM20Q8N5G0 LBH-205ENST00000407930 756 ntTSL 2 BASIC11.47□□□□□ -0.57
SMIM20Q8N5G0 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC11.47□□□□□ -0.57
SMIM20Q8N5G0 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC11.47□□□□□ -0.57
SMIM20Q8N5G0 CHML-204ENST00000638121 920 ntTSL 2 BASIC11.47□□□□□ -0.57
SMIM20Q8N5G0 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SMIM20Q8N5G0 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
SMIM20Q8N5G0 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
SMIM20Q8N5G0 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
SMIM20Q8N5G0 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SMIM20Q8N5G0 MBP-202ENST00000355994 2772 ntTSL 5 BASIC11.47□□□□□ -0.57
SMIM20Q8N5G0 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
SMIM20Q8N5G0 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
SMIM20Q8N5G0 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SMIM20Q8N5G0 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SMIM20Q8N5G0 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SMIM20Q8N5G0 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SMIM20Q8N5G0 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
SMIM20Q8N5G0 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SMIM20Q8N5G0 AC007950.2-201ENST00000615045 2347 ntBASIC11.47□□□□□ -0.57
SMIM20Q8N5G0 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SMIM20Q8N5G0 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
SMIM20Q8N5G0 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC11.47□□□□□ -0.57
SMIM20Q8N5G0 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
SMIM20Q8N5G0 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SMIM20Q8N5G0 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms