Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CROCCP3Q8IVE0 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
CROCCP3Q8IVE0 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CROCCP3Q8IVE0 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CROCCP3Q8IVE0 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.72■□□□□ 0.27
CROCCP3Q8IVE0 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CROCCP3Q8IVE0 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC16.72■□□□□ 0.27
CROCCP3Q8IVE0 AC105020.1-201ENST00000435356 2205 ntBASIC16.72■□□□□ 0.27
CROCCP3Q8IVE0 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CROCCP3Q8IVE0 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CROCCP3Q8IVE0 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
CROCCP3Q8IVE0 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
CROCCP3Q8IVE0 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CROCCP3Q8IVE0 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CROCCP3Q8IVE0 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CROCCP3Q8IVE0 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CROCCP3Q8IVE0 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
CROCCP3Q8IVE0 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
CROCCP3Q8IVE0 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CROCCP3Q8IVE0 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CROCCP3Q8IVE0 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
CROCCP3Q8IVE0 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC16.71■□□□□ 0.27
CROCCP3Q8IVE0 AC007322.4-201ENST00000509611 723 ntBASIC16.71■□□□□ 0.27
CROCCP3Q8IVE0 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC16.71■□□□□ 0.27
CROCCP3Q8IVE0 MYCNOS-205ENST00000641950 531 ntBASIC16.71■□□□□ 0.27
CROCCP3Q8IVE0 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CROCCP3Q8IVE0 GCK-205ENST00000437084 1385 ntTSL 5 BASIC16.71■□□□□ 0.27
CROCCP3Q8IVE0 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
CROCCP3Q8IVE0 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CROCCP3Q8IVE0 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
CROCCP3Q8IVE0 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CROCCP3Q8IVE0 ANKRD18DP-204ENST00000455355 1975 ntBASIC16.71■□□□□ 0.27
CROCCP3Q8IVE0 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CROCCP3Q8IVE0 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
CROCCP3Q8IVE0 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
CROCCP3Q8IVE0 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.26
CROCCP3Q8IVE0 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.26
CROCCP3Q8IVE0 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC16.7■□□□□ 0.26
CROCCP3Q8IVE0 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CROCCP3Q8IVE0 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CROCCP3Q8IVE0 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CROCCP3Q8IVE0 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.7■□□□□ 0.26
CROCCP3Q8IVE0 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CROCCP3Q8IVE0 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC16.7■□□□□ 0.26
CROCCP3Q8IVE0 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CROCCP3Q8IVE0 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CROCCP3Q8IVE0 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CROCCP3Q8IVE0 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CROCCP3Q8IVE0 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CROCCP3Q8IVE0 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
CROCCP3Q8IVE0 AC123595.1-201ENST00000440769 1046 ntBASIC16.7■□□□□ 0.26
CROCCP3Q8IVE0 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CROCCP3Q8IVE0 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.7■□□□□ 0.26
CROCCP3Q8IVE0 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CROCCP3Q8IVE0 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CROCCP3Q8IVE0 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CROCCP3Q8IVE0 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.7■□□□□ 0.26
CROCCP3Q8IVE0 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CROCCP3Q8IVE0 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CROCCP3Q8IVE0 AC104417.2-201ENST00000562989 1793 ntBASIC16.69■□□□□ 0.26
CROCCP3Q8IVE0 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC16.69■□□□□ 0.26
CROCCP3Q8IVE0 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
CROCCP3Q8IVE0 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CROCCP3Q8IVE0 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CROCCP3Q8IVE0 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC16.69■□□□□ 0.26
CROCCP3Q8IVE0 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
CROCCP3Q8IVE0 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CROCCP3Q8IVE0 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CROCCP3Q8IVE0 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
CROCCP3Q8IVE0 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CROCCP3Q8IVE0 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CROCCP3Q8IVE0 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC16.69■□□□□ 0.26
CROCCP3Q8IVE0 CALM3-202ENST00000391918 702 ntTSL 2 BASIC16.69■□□□□ 0.26
CROCCP3Q8IVE0 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC16.69■□□□□ 0.26
CROCCP3Q8IVE0 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC16.69■□□□□ 0.26
CROCCP3Q8IVE0 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC16.69■□□□□ 0.26
CROCCP3Q8IVE0 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC16.69■□□□□ 0.26
CROCCP3Q8IVE0 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CROCCP3Q8IVE0 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC16.69■□□□□ 0.26
CROCCP3Q8IVE0 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
CROCCP3Q8IVE0 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CROCCP3Q8IVE0 UBE2DNL-204ENST00000602536 740 ntBASIC16.69■□□□□ 0.26
CROCCP3Q8IVE0 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CROCCP3Q8IVE0 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CROCCP3Q8IVE0 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CROCCP3Q8IVE0 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.69■□□□□ 0.26
CROCCP3Q8IVE0 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.69■□□□□ 0.26
CROCCP3Q8IVE0 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CROCCP3Q8IVE0 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CROCCP3Q8IVE0 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CROCCP3Q8IVE0 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.69■□□□□ 0.26
CROCCP3Q8IVE0 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CROCCP3Q8IVE0 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CROCCP3Q8IVE0 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CROCCP3Q8IVE0 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CROCCP3Q8IVE0 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CROCCP3Q8IVE0 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CROCCP3Q8IVE0 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC16.69■□□□□ 0.26
CROCCP3Q8IVE0 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CROCCP3Q8IVE0 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms