Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LYSMD2Q8IV50 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
LYSMD2Q8IV50 CALM3-202ENST00000391918 702 ntTSL 2 BASIC16.19■□□□□ 0.18
LYSMD2Q8IV50 CNN2P6-201ENST00000439038 900 ntBASIC16.19■□□□□ 0.18
LYSMD2Q8IV50 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC16.19■□□□□ 0.18
LYSMD2Q8IV50 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC16.19■□□□□ 0.18
LYSMD2Q8IV50 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
LYSMD2Q8IV50 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LYSMD2Q8IV50 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LYSMD2Q8IV50 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
LYSMD2Q8IV50 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
LYSMD2Q8IV50 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LYSMD2Q8IV50 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
LYSMD2Q8IV50 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LYSMD2Q8IV50 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.19■□□□□ 0.18
LYSMD2Q8IV50 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LYSMD2Q8IV50 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.19■□□□□ 0.18
LYSMD2Q8IV50 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LYSMD2Q8IV50 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LYSMD2Q8IV50 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.19■□□□□ 0.18
LYSMD2Q8IV50 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LYSMD2Q8IV50 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
LYSMD2Q8IV50 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC16.19■□□□□ 0.18
LYSMD2Q8IV50 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.19■□□□□ 0.18
LYSMD2Q8IV50 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LYSMD2Q8IV50 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LYSMD2Q8IV50 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
LYSMD2Q8IV50 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
LYSMD2Q8IV50 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LYSMD2Q8IV50 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.18■□□□□ 0.18
LYSMD2Q8IV50 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LYSMD2Q8IV50 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LYSMD2Q8IV50 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LYSMD2Q8IV50 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
LYSMD2Q8IV50 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LYSMD2Q8IV50 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LYSMD2Q8IV50 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.18■□□□□ 0.18
LYSMD2Q8IV50 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC16.18■□□□□ 0.18
LYSMD2Q8IV50 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
LYSMD2Q8IV50 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC16.18■□□□□ 0.18
LYSMD2Q8IV50 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
LYSMD2Q8IV50 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
LYSMD2Q8IV50 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.18■□□□□ 0.18
LYSMD2Q8IV50 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LYSMD2Q8IV50 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
LYSMD2Q8IV50 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC16.18■□□□□ 0.18
LYSMD2Q8IV50 SPI1-203ENST00000533030 661 ntTSL 2 BASIC16.18■□□□□ 0.18
LYSMD2Q8IV50 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC16.18■□□□□ 0.18
LYSMD2Q8IV50 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC16.18■□□□□ 0.18
LYSMD2Q8IV50 PCDHA14-201ENST00000506751 2298 ntBASIC16.18■□□□□ 0.18
LYSMD2Q8IV50 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LYSMD2Q8IV50 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
LYSMD2Q8IV50 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LYSMD2Q8IV50 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
LYSMD2Q8IV50 AC008741.2-201ENST00000612792 3115 ntBASIC16.18■□□□□ 0.18
LYSMD2Q8IV50 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LYSMD2Q8IV50 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LYSMD2Q8IV50 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LYSMD2Q8IV50 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LYSMD2Q8IV50 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LYSMD2Q8IV50 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.18■□□□□ 0.18
LYSMD2Q8IV50 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LYSMD2Q8IV50 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.18■□□□□ 0.18
LYSMD2Q8IV50 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LYSMD2Q8IV50 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LYSMD2Q8IV50 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LYSMD2Q8IV50 LINC00554-201ENST00000564841 3011 ntBASIC16.17■□□□□ 0.18
LYSMD2Q8IV50 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
LYSMD2Q8IV50 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.17■□□□□ 0.18
LYSMD2Q8IV50 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
LYSMD2Q8IV50 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC16.17■□□□□ 0.18
LYSMD2Q8IV50 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.17■□□□□ 0.18
LYSMD2Q8IV50 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
LYSMD2Q8IV50 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LYSMD2Q8IV50 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
LYSMD2Q8IV50 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LYSMD2Q8IV50 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC16.17■□□□□ 0.18
LYSMD2Q8IV50 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC16.17■□□□□ 0.18
LYSMD2Q8IV50 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC16.17■□□□□ 0.18
LYSMD2Q8IV50 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC16.17■□□□□ 0.18
LYSMD2Q8IV50 AL589743.5-201ENST00000616611 1050 ntBASIC16.17■□□□□ 0.18
LYSMD2Q8IV50 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.17■□□□□ 0.18
LYSMD2Q8IV50 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC16.17■□□□□ 0.18
LYSMD2Q8IV50 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
LYSMD2Q8IV50 MOK-233ENST00000524214 1539 ntTSL 2 BASIC16.17■□□□□ 0.18
LYSMD2Q8IV50 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LYSMD2Q8IV50 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LYSMD2Q8IV50 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
LYSMD2Q8IV50 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LYSMD2Q8IV50 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LYSMD2Q8IV50 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.17■□□□□ 0.18
LYSMD2Q8IV50 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.17■□□□□ 0.18
LYSMD2Q8IV50 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LYSMD2Q8IV50 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
LYSMD2Q8IV50 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LYSMD2Q8IV50 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LYSMD2Q8IV50 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
LYSMD2Q8IV50 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
LYSMD2Q8IV50 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LYSMD2Q8IV50 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms