Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
RFX6Q8HWS3 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RFX6Q8HWS3 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
RFX6Q8HWS3 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RFX6Q8HWS3 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
RFX6Q8HWS3 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.17■□□□□ 0.66
RFX6Q8HWS3 KRT8P50-201ENST00000562022 1438 ntBASIC19.17■□□□□ 0.66
RFX6Q8HWS3 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
RFX6Q8HWS3 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RFX6Q8HWS3 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.17■□□□□ 0.66
RFX6Q8HWS3 PXK-206ENST00000463280 2825 ntTSL 2 BASIC19.17■□□□□ 0.66
RFX6Q8HWS3 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RFX6Q8HWS3 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC19.17■□□□□ 0.66
RFX6Q8HWS3 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RFX6Q8HWS3 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.17■□□□□ 0.66
RFX6Q8HWS3 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC19.17■□□□□ 0.66
RFX6Q8HWS3 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RFX6Q8HWS3 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RFX6Q8HWS3 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC19.17■□□□□ 0.66
RFX6Q8HWS3 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RFX6Q8HWS3 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.17■□□□□ 0.66
RFX6Q8HWS3 SLC25A1P2-201ENST00000430693 912 ntBASIC19.17■□□□□ 0.66
RFX6Q8HWS3 AL355075.4-201ENST00000554988 638 ntBASIC19.17■□□□□ 0.66
RFX6Q8HWS3 FITM1-202ENST00000559294 800 ntBASIC19.17■□□□□ 0.66
RFX6Q8HWS3 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC19.17■□□□□ 0.66
RFX6Q8HWS3 AL023803.3-201ENST00000615559 522 ntBASIC19.17■□□□□ 0.66
RFX6Q8HWS3 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.17■□□□□ 0.66
RFX6Q8HWS3 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RFX6Q8HWS3 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
RFX6Q8HWS3 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RFX6Q8HWS3 KRT17P2-201ENST00000300992 1314 ntBASIC19.17■□□□□ 0.66
RFX6Q8HWS3 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RFX6Q8HWS3 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
RFX6Q8HWS3 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
RFX6Q8HWS3 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RFX6Q8HWS3 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RFX6Q8HWS3 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RFX6Q8HWS3 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RFX6Q8HWS3 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RFX6Q8HWS3 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19.16■□□□□ 0.66
RFX6Q8HWS3 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RFX6Q8HWS3 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RFX6Q8HWS3 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.16■□□□□ 0.66
RFX6Q8HWS3 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC19.16■□□□□ 0.66
RFX6Q8HWS3 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.16■□□□□ 0.66
RFX6Q8HWS3 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC19.16■□□□□ 0.66
RFX6Q8HWS3 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.16■□□□□ 0.66
RFX6Q8HWS3 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.16■□□□□ 0.66
RFX6Q8HWS3 TSPY17P-201ENST00000450329 467 ntBASIC19.16■□□□□ 0.66
RFX6Q8HWS3 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC19.16■□□□□ 0.66
RFX6Q8HWS3 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC19.16■□□□□ 0.66
RFX6Q8HWS3 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RFX6Q8HWS3 AL353719.1-201ENST00000566847 864 ntBASIC19.16■□□□□ 0.66
RFX6Q8HWS3 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RFX6Q8HWS3 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RFX6Q8HWS3 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
RFX6Q8HWS3 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
RFX6Q8HWS3 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
RFX6Q8HWS3 AC099343.3-201ENST00000605834 2503 ntBASIC19.16■□□□□ 0.66
RFX6Q8HWS3 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RFX6Q8HWS3 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RFX6Q8HWS3 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC19.16■□□□□ 0.66
RFX6Q8HWS3 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC19.16■□□□□ 0.66
RFX6Q8HWS3 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
RFX6Q8HWS3 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.15■□□□□ 0.66
RFX6Q8HWS3 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RFX6Q8HWS3 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RFX6Q8HWS3 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RFX6Q8HWS3 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.15■□□□□ 0.66
RFX6Q8HWS3 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.15■□□□□ 0.66
RFX6Q8HWS3 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19.15■□□□□ 0.66
RFX6Q8HWS3 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RFX6Q8HWS3 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RFX6Q8HWS3 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RFX6Q8HWS3 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RFX6Q8HWS3 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RFX6Q8HWS3 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
RFX6Q8HWS3 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.15■□□□□ 0.66
RFX6Q8HWS3 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RFX6Q8HWS3 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RFX6Q8HWS3 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
RFX6Q8HWS3 CCR12P-201ENST00000446203 998 ntBASIC19.15■□□□□ 0.66
RFX6Q8HWS3 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC19.15■□□□□ 0.66
RFX6Q8HWS3 HR-201ENST00000312841 5351 ntTSL 5 BASIC19.15■□□□□ 0.66
RFX6Q8HWS3 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
RFX6Q8HWS3 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RFX6Q8HWS3 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RFX6Q8HWS3 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC19.15■□□□□ 0.66
RFX6Q8HWS3 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
RFX6Q8HWS3 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RFX6Q8HWS3 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RFX6Q8HWS3 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RFX6Q8HWS3 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RFX6Q8HWS3 ESPNP-201ENST00000270691 2015 ntBASIC19.15■□□□□ 0.66
RFX6Q8HWS3 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RFX6Q8HWS3 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC19.15■□□□□ 0.66
RFX6Q8HWS3 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC19.15■□□□□ 0.66
RFX6Q8HWS3 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC19.15■□□□□ 0.66
RFX6Q8HWS3 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RFX6Q8HWS3 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms