Protein–RNA interactions for Protein: Q6ZUS6

CCDC149, Coiled-coil domain-containing protein 149, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149Q6ZUS6 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC149Q6ZUS6 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
CCDC149Q6ZUS6 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
CCDC149Q6ZUS6 HES2-202ENST00000377836 507 ntTSL 2 BASIC19.33■□□□□ 0.68
CCDC149Q6ZUS6 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC19.33■□□□□ 0.68
CCDC149Q6ZUS6 PMS2P1-201ENST00000431037 1228 ntBASIC19.33■□□□□ 0.68
CCDC149Q6ZUS6 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC19.33■□□□□ 0.68
CCDC149Q6ZUS6 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC19.33■□□□□ 0.68
CCDC149Q6ZUS6 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC19.33■□□□□ 0.68
CCDC149Q6ZUS6 ABR-217ENST00000572441 563 ntTSL 4 BASIC19.33■□□□□ 0.68
CCDC149Q6ZUS6 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC19.33■□□□□ 0.68
CCDC149Q6ZUS6 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC19.33■□□□□ 0.68
CCDC149Q6ZUS6 AC083906.6-201ENST00000641366 219 ntBASIC19.33■□□□□ 0.68
CCDC149Q6ZUS6 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC149Q6ZUS6 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
CCDC149Q6ZUS6 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC149Q6ZUS6 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
CCDC149Q6ZUS6 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.33■□□□□ 0.68
CCDC149Q6ZUS6 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.68
CCDC149Q6ZUS6 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC149Q6ZUS6 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC149Q6ZUS6 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
CCDC149Q6ZUS6 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.32■□□□□ 0.68
CCDC149Q6ZUS6 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC149Q6ZUS6 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC149Q6ZUS6 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC149Q6ZUS6 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC149Q6ZUS6 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC149Q6ZUS6 MIR149-201ENST00000384879 89 ntBASIC19.32■□□□□ 0.68
CCDC149Q6ZUS6 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC149Q6ZUS6 DDT-203ENST00000403754 569 ntTSL 3 BASIC19.32■□□□□ 0.68
CCDC149Q6ZUS6 DDT-206ENST00000430101 573 ntTSL 2 BASIC19.32■□□□□ 0.68
CCDC149Q6ZUS6 BET1L-206ENST00000486280 665 ntTSL 3 BASIC19.32■□□□□ 0.68
CCDC149Q6ZUS6 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC19.32■□□□□ 0.68
CCDC149Q6ZUS6 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC149Q6ZUS6 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC19.32■□□□□ 0.68
CCDC149Q6ZUS6 CCNC-219ENST00000627680 896 ntTSL 5 BASIC19.32■□□□□ 0.68
CCDC149Q6ZUS6 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.32■□□□□ 0.68
CCDC149Q6ZUS6 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC149Q6ZUS6 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.32■□□□□ 0.68
CCDC149Q6ZUS6 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC149Q6ZUS6 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC149Q6ZUS6 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC149Q6ZUS6 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
CCDC149Q6ZUS6 PPIE-208ENST00000470213 927 ntTSL 3 BASIC19.31■□□□□ 0.68
CCDC149Q6ZUS6 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC149Q6ZUS6 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC19.31■□□□□ 0.68
CCDC149Q6ZUS6 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
CCDC149Q6ZUS6 AP001005.1-201ENST00000571755 1248 ntBASIC19.31■□□□□ 0.68
CCDC149Q6ZUS6 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC149Q6ZUS6 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
CCDC149Q6ZUS6 AL671883.3-201ENST00000603274 991 ntBASIC19.31■□□□□ 0.68
CCDC149Q6ZUS6 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CCDC149Q6ZUS6 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC19.31■□□□□ 0.68
CCDC149Q6ZUS6 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC149Q6ZUS6 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC149Q6ZUS6 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC19.31■□□□□ 0.68
CCDC149Q6ZUS6 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC149Q6ZUS6 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC149Q6ZUS6 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CCDC149Q6ZUS6 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.3■□□□□ 0.68
CCDC149Q6ZUS6 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC149Q6ZUS6 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC149Q6ZUS6 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC149Q6ZUS6 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC149Q6ZUS6 MINOS1P3-201ENST00000457048 203 ntBASIC19.3■□□□□ 0.68
CCDC149Q6ZUS6 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC19.3■□□□□ 0.68
CCDC149Q6ZUS6 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC19.3■□□□□ 0.68
CCDC149Q6ZUS6 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CCDC149Q6ZUS6 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC149Q6ZUS6 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC149Q6ZUS6 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC149Q6ZUS6 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
CCDC149Q6ZUS6 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.29■□□□□ 0.68
CCDC149Q6ZUS6 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.29■□□□□ 0.68
CCDC149Q6ZUS6 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC149Q6ZUS6 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC149Q6ZUS6 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC149Q6ZUS6 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC149Q6ZUS6 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC149Q6ZUS6 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CCDC149Q6ZUS6 LSM5-204ENST00000409909 740 ntTSL 2 BASIC19.29■□□□□ 0.68
CCDC149Q6ZUS6 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC19.29■□□□□ 0.68
CCDC149Q6ZUS6 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC19.29■□□□□ 0.68
CCDC149Q6ZUS6 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CCDC149Q6ZUS6 AF238378.1-201ENST00000526806 358 ntBASIC19.29■□□□□ 0.68
CCDC149Q6ZUS6 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CCDC149Q6ZUS6 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC19.29■□□□□ 0.68
CCDC149Q6ZUS6 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC149Q6ZUS6 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC149Q6ZUS6 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC19.29■□□□□ 0.68
CCDC149Q6ZUS6 AL773604.1-201ENST00000617417 272 ntBASIC19.29■□□□□ 0.68
CCDC149Q6ZUS6 ANKRD20A8P-203ENST00000641373 517 ntBASIC19.29■□□□□ 0.68
CCDC149Q6ZUS6 AC007952.6-201ENST00000573168 2673 ntBASIC19.29■□□□□ 0.68
CCDC149Q6ZUS6 AC003957.1-201ENST00000625108 2673 ntBASIC19.29■□□□□ 0.68
CCDC149Q6ZUS6 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC149Q6ZUS6 ASL-204ENST00000395331 1538 ntTSL 5 BASIC19.29■□□□□ 0.68
CCDC149Q6ZUS6 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC149Q6ZUS6 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
CCDC149Q6ZUS6 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms