Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VARS2Q5ST30 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
VARS2Q5ST30 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
VARS2Q5ST30 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VARS2Q5ST30 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VARS2Q5ST30 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
VARS2Q5ST30 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
VARS2Q5ST30 STK33P1-201ENST00000423835 1218 ntBASIC19.46■□□□□ 0.71
VARS2Q5ST30 AL845331.1-201ENST00000424978 1190 ntBASIC19.46■□□□□ 0.71
VARS2Q5ST30 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
VARS2Q5ST30 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC19.46■□□□□ 0.71
VARS2Q5ST30 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC19.46■□□□□ 0.71
VARS2Q5ST30 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
VARS2Q5ST30 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC19.46■□□□□ 0.71
VARS2Q5ST30 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC19.46■□□□□ 0.71
VARS2Q5ST30 Z69720.1-201ENST00000601483 472 ntBASIC19.46■□□□□ 0.71
VARS2Q5ST30 IFNL4P1-201ENST00000607083 540 ntBASIC19.46■□□□□ 0.71
VARS2Q5ST30 AL121772.3-201ENST00000610840 674 ntBASIC19.46■□□□□ 0.71
VARS2Q5ST30 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC19.46■□□□□ 0.71
VARS2Q5ST30 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VARS2Q5ST30 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VARS2Q5ST30 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VARS2Q5ST30 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.46■□□□□ 0.71
VARS2Q5ST30 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19.46■□□□□ 0.71
VARS2Q5ST30 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
VARS2Q5ST30 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.46■□□□□ 0.71
VARS2Q5ST30 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
VARS2Q5ST30 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC19.45■□□□□ 0.7
VARS2Q5ST30 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VARS2Q5ST30 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.45■□□□□ 0.7
VARS2Q5ST30 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
VARS2Q5ST30 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VARS2Q5ST30 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VARS2Q5ST30 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
VARS2Q5ST30 KRT17P6-201ENST00000453795 1220 ntBASIC19.45■□□□□ 0.7
VARS2Q5ST30 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC19.45■□□□□ 0.7
VARS2Q5ST30 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VARS2Q5ST30 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC19.45■□□□□ 0.7
VARS2Q5ST30 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
VARS2Q5ST30 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC19.45■□□□□ 0.7
VARS2Q5ST30 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC19.45■□□□□ 0.7
VARS2Q5ST30 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
VARS2Q5ST30 AC244517.3-201ENST00000616254 1235 ntBASIC19.45■□□□□ 0.7
VARS2Q5ST30 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC19.45■□□□□ 0.7
VARS2Q5ST30 AC023511.2-201ENST00000618803 211 ntBASIC19.45■□□□□ 0.7
VARS2Q5ST30 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC19.45■□□□□ 0.7
VARS2Q5ST30 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
VARS2Q5ST30 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
VARS2Q5ST30 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC19.45■□□□□ 0.7
VARS2Q5ST30 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VARS2Q5ST30 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
VARS2Q5ST30 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
VARS2Q5ST30 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VARS2Q5ST30 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
VARS2Q5ST30 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
VARS2Q5ST30 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
VARS2Q5ST30 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VARS2Q5ST30 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VARS2Q5ST30 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VARS2Q5ST30 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
VARS2Q5ST30 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VARS2Q5ST30 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
VARS2Q5ST30 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VARS2Q5ST30 AC004870.1-201ENST00000315132 882 ntBASIC19.44■□□□□ 0.7
VARS2Q5ST30 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VARS2Q5ST30 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
VARS2Q5ST30 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC19.44■□□□□ 0.7
VARS2Q5ST30 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC19.44■□□□□ 0.7
VARS2Q5ST30 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC19.44■□□□□ 0.7
VARS2Q5ST30 AC091304.2-201ENST00000564639 760 ntBASIC19.44■□□□□ 0.7
VARS2Q5ST30 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
VARS2Q5ST30 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC19.44■□□□□ 0.7
VARS2Q5ST30 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC19.44■□□□□ 0.7
VARS2Q5ST30 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
VARS2Q5ST30 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
VARS2Q5ST30 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VARS2Q5ST30 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VARS2Q5ST30 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
VARS2Q5ST30 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.44■□□□□ 0.7
VARS2Q5ST30 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
VARS2Q5ST30 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
VARS2Q5ST30 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
VARS2Q5ST30 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VARS2Q5ST30 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.43■□□□□ 0.7
VARS2Q5ST30 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.43■□□□□ 0.7
VARS2Q5ST30 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC19.43■□□□□ 0.7
VARS2Q5ST30 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
VARS2Q5ST30 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
VARS2Q5ST30 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VARS2Q5ST30 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VARS2Q5ST30 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC19.43■□□□□ 0.7
VARS2Q5ST30 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.43■□□□□ 0.7
VARS2Q5ST30 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
VARS2Q5ST30 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
VARS2Q5ST30 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
VARS2Q5ST30 IGHV3-47-201ENST00000425060 335 ntBASIC19.43■□□□□ 0.7
VARS2Q5ST30 AC091607.1-201ENST00000490318 1060 ntBASIC19.43■□□□□ 0.7
VARS2Q5ST30 KRT18P31-201ENST00000506277 1292 ntBASIC19.43■□□□□ 0.7
VARS2Q5ST30 AC113404.2-201ENST00000507884 177 ntBASIC19.43■□□□□ 0.7
VARS2Q5ST30 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms