Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRRK2Q5S007 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LRRK2Q5S007 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC15.91■□□□□ 0.14
LRRK2Q5S007 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRRK2Q5S007 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC15.91■□□□□ 0.14
LRRK2Q5S007 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LRRK2Q5S007 AC002472.2-201ENST00000442739 958 ntBASIC15.91■□□□□ 0.14
LRRK2Q5S007 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC15.91■□□□□ 0.14
LRRK2Q5S007 TCAP-202ENST00000578283 583 ntTSL 5 BASIC15.91■□□□□ 0.14
LRRK2Q5S007 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC15.91■□□□□ 0.14
LRRK2Q5S007 AC006557.2-201ENST00000592985 1240 ntBASIC15.91■□□□□ 0.14
LRRK2Q5S007 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRRK2Q5S007 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
LRRK2Q5S007 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRRK2Q5S007 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LRRK2Q5S007 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRRK2Q5S007 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
LRRK2Q5S007 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRRK2Q5S007 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRRK2Q5S007 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
LRRK2Q5S007 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
LRRK2Q5S007 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRRK2Q5S007 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
LRRK2Q5S007 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LRRK2Q5S007 HCG4B-203ENST00000450128 991 ntBASIC15.9■□□□□ 0.14
LRRK2Q5S007 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC15.9■□□□□ 0.14
LRRK2Q5S007 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC15.9■□□□□ 0.14
LRRK2Q5S007 AP000344.2-201ENST00000512987 629 ntBASIC15.9■□□□□ 0.14
LRRK2Q5S007 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC15.9■□□□□ 0.14
LRRK2Q5S007 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC15.9■□□□□ 0.14
LRRK2Q5S007 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
LRRK2Q5S007 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LRRK2Q5S007 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LRRK2Q5S007 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
LRRK2Q5S007 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC15.9■□□□□ 0.14
LRRK2Q5S007 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRRK2Q5S007 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LRRK2Q5S007 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
LRRK2Q5S007 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LRRK2Q5S007 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC15.9■□□□□ 0.14
LRRK2Q5S007 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRRK2Q5S007 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC15.9■□□□□ 0.14
LRRK2Q5S007 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRRK2Q5S007 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRRK2Q5S007 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC15.9■□□□□ 0.14
LRRK2Q5S007 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC15.9■□□□□ 0.14
LRRK2Q5S007 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15.9■□□□□ 0.14
LRRK2Q5S007 PDPK2P-202ENST00000562415 1191 ntBASIC15.9■□□□□ 0.14
LRRK2Q5S007 AC064836.3-201ENST00000607928 673 ntBASIC15.9■□□□□ 0.14
LRRK2Q5S007 AC073592.4-201ENST00000623827 446 ntBASIC15.9■□□□□ 0.14
LRRK2Q5S007 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.14
LRRK2Q5S007 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
LRRK2Q5S007 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRRK2Q5S007 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC15.89■□□□□ 0.13
LRRK2Q5S007 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LRRK2Q5S007 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
LRRK2Q5S007 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LRRK2Q5S007 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRRK2Q5S007 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LRRK2Q5S007 VN2R19P-201ENST00000442399 1052 ntBASIC15.89■□□□□ 0.13
LRRK2Q5S007 AC004817.3-201ENST00000602957 2129 ntBASIC15.89■□□□□ 0.13
LRRK2Q5S007 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC15.89■□□□□ 0.13
LRRK2Q5S007 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LRRK2Q5S007 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LRRK2Q5S007 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LRRK2Q5S007 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRRK2Q5S007 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC15.89■□□□□ 0.13
LRRK2Q5S007 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRRK2Q5S007 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRRK2Q5S007 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC15.89■□□□□ 0.13
LRRK2Q5S007 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRRK2Q5S007 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRRK2Q5S007 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC15.89■□□□□ 0.13
LRRK2Q5S007 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC15.89■□□□□ 0.13
LRRK2Q5S007 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LRRK2Q5S007 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC15.89■□□□□ 0.13
LRRK2Q5S007 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC15.89■□□□□ 0.13
LRRK2Q5S007 SDCCAG3P1-201ENST00000589292 1150 ntBASIC15.89■□□□□ 0.13
LRRK2Q5S007 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
LRRK2Q5S007 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC15.89■□□□□ 0.13
LRRK2Q5S007 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LRRK2Q5S007 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRRK2Q5S007 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRRK2Q5S007 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRRK2Q5S007 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LRRK2Q5S007 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRRK2Q5S007 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
LRRK2Q5S007 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC15.88■□□□□ 0.13
LRRK2Q5S007 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC15.88■□□□□ 0.13
LRRK2Q5S007 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC15.88■□□□□ 0.13
LRRK2Q5S007 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC15.88■□□□□ 0.13
LRRK2Q5S007 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRRK2Q5S007 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC15.88■□□□□ 0.13
LRRK2Q5S007 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LRRK2Q5S007 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRRK2Q5S007 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC15.88■□□□□ 0.13
LRRK2Q5S007 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC15.88■□□□□ 0.13
LRRK2Q5S007 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC15.88■□□□□ 0.13
LRRK2Q5S007 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC15.88■□□□□ 0.13
LRRK2Q5S007 AL359881.2-201ENST00000602973 570 ntBASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms