Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.2■□□□□ 0.5
CDKN2DP55273 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CDKN2DP55273 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDKN2DP55273 AC010653.2-201ENST00000623505 997 ntBASIC18.2■□□□□ 0.5
CDKN2DP55273 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CDKN2DP55273 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDKN2DP55273 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDKN2DP55273 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CDKN2DP55273 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CDKN2DP55273 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CDKN2DP55273 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
CDKN2DP55273 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDKN2DP55273 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
CDKN2DP55273 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDKN2DP55273 AC009102.3-201ENST00000623118 1491 ntBASIC18.2■□□□□ 0.5
CDKN2DP55273 PHGDH-209ENST00000641074 1780 ntBASIC18.19■□□□□ 0.5
CDKN2DP55273 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CDKN2DP55273 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CDKN2DP55273 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CDKN2DP55273 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CDKN2DP55273 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.19■□□□□ 0.5
CDKN2DP55273 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CDKN2DP55273 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.19■□□□□ 0.5
CDKN2DP55273 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CDKN2DP55273 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.19■□□□□ 0.5
CDKN2DP55273 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDKN2DP55273 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDKN2DP55273 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.19■□□□□ 0.5
CDKN2DP55273 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CDKN2DP55273 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CDKN2DP55273 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDKN2DP55273 MIR149-201ENST00000384879 89 ntBASIC18.19■□□□□ 0.5
CDKN2DP55273 AL596275.1-201ENST00000423464 877 ntBASIC18.19■□□□□ 0.5
CDKN2DP55273 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.19■□□□□ 0.5
CDKN2DP55273 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC18.19■□□□□ 0.5
CDKN2DP55273 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
CDKN2DP55273 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.19■□□□□ 0.5
CDKN2DP55273 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CDKN2DP55273 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
CDKN2DP55273 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CDKN2DP55273 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CDKN2DP55273 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CDKN2DP55273 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CDKN2DP55273 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDKN2DP55273 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.19■□□□□ 0.5
CDKN2DP55273 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CDKN2DP55273 AL096828.2-201ENST00000567259 1965 ntBASIC18.19■□□□□ 0.5
CDKN2DP55273 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
CDKN2DP55273 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.18■□□□□ 0.5
CDKN2DP55273 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CDKN2DP55273 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDKN2DP55273 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
CDKN2DP55273 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDKN2DP55273 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDKN2DP55273 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDKN2DP55273 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CDKN2DP55273 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
CDKN2DP55273 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CDKN2DP55273 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.18■□□□□ 0.5
CDKN2DP55273 KRT8P7-201ENST00000533003 1432 ntBASIC18.18■□□□□ 0.5
CDKN2DP55273 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDKN2DP55273 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDKN2DP55273 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDKN2DP55273 GXYLT1P6-201ENST00000456472 1187 ntBASIC18.18■□□□□ 0.5
CDKN2DP55273 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
CDKN2DP55273 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC18.18■□□□□ 0.5
CDKN2DP55273 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CDKN2DP55273 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.18■□□□□ 0.5
CDKN2DP55273 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDKN2DP55273 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDKN2DP55273 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDKN2DP55273 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CDKN2DP55273 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
CDKN2DP55273 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDKN2DP55273 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CDKN2DP55273 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDKN2DP55273 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.17■□□□□ 0.5
CDKN2DP55273 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDKN2DP55273 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CDKN2DP55273 AC138028.4-201ENST00000564984 1845 ntBASIC18.17■□□□□ 0.5
CDKN2DP55273 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDKN2DP55273 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.17■□□□□ 0.5
CDKN2DP55273 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CDKN2DP55273 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CDKN2DP55273 MMP23A-201ENST00000234610 1017 ntBASIC18.17■□□□□ 0.5
CDKN2DP55273 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
CDKN2DP55273 AC093827.2-201ENST00000512654 315 ntBASIC18.17■□□□□ 0.5
CDKN2DP55273 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
CDKN2DP55273 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CDKN2DP55273 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.17■□□□□ 0.5
CDKN2DP55273 NAPSB-206ENST00000562112 1266 ntBASIC18.17■□□□□ 0.5
CDKN2DP55273 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.17■□□□□ 0.5
CDKN2DP55273 FAM87A-204ENST00000613235 858 ntBASIC18.17■□□□□ 0.5
CDKN2DP55273 AC112497.1-201ENST00000624824 639 ntBASIC18.17■□□□□ 0.5
CDKN2DP55273 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDKN2DP55273 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDKN2DP55273 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDKN2DP55273 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.17■□□□□ 0.5
CDKN2DP55273 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDKN2DP55273 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms