Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
SMSP52788 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SMSP52788 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
SMSP52788 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
SMSP52788 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
SMSP52788 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
SMSP52788 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
SMSP52788 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
SMSP52788 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SMSP52788 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SMSP52788 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
SMSP52788 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.27■□□□□ 0.35
SMSP52788 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
SMSP52788 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SMSP52788 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
SMSP52788 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
SMSP52788 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
SMSP52788 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC17.26■□□□□ 0.35
SMSP52788 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMSP52788 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SMSP52788 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMSP52788 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.26■□□□□ 0.35
SMSP52788 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.26■□□□□ 0.35
SMSP52788 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMSP52788 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
SMSP52788 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMSP52788 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMSP52788 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
SMSP52788 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
SMSP52788 TSPY17P-201ENST00000450329 467 ntBASIC17.26■□□□□ 0.35
SMSP52788 YBX1P2-201ENST00000489612 999 ntBASIC17.26■□□□□ 0.35
SMSP52788 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC17.26■□□□□ 0.35
SMSP52788 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC17.26■□□□□ 0.35
SMSP52788 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.26■□□□□ 0.35
SMSP52788 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMSP52788 AL138966.2-201ENST00000621997 464 ntBASIC17.26■□□□□ 0.35
SMSP52788 AP000550.4-202ENST00000639755 178 ntBASIC17.26■□□□□ 0.35
SMSP52788 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMSP52788 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
SMSP52788 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SMSP52788 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.26■□□□□ 0.35
SMSP52788 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMSP52788 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
SMSP52788 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.26■□□□□ 0.35
SMSP52788 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMSP52788 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.25■□□□□ 0.35
SMSP52788 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.25■□□□□ 0.35
SMSP52788 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
SMSP52788 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMSP52788 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMSP52788 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMSP52788 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SMSP52788 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMSP52788 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMSP52788 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMSP52788 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
SMSP52788 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.25■□□□□ 0.35
SMSP52788 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMSP52788 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMSP52788 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMSP52788 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.25■□□□□ 0.35
SMSP52788 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SMSP52788 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC17.25■□□□□ 0.35
SMSP52788 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMSP52788 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SMSP52788 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SMSP52788 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SMSP52788 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.25■□□□□ 0.35
SMSP52788 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SMSP52788 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SMSP52788 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMSP52788 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMSP52788 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMSP52788 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMSP52788 NOC2LP2-201ENST00000407594 1944 ntBASIC17.25■□□□□ 0.35
SMSP52788 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMSP52788 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SMSP52788 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
SMSP52788 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMSP52788 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMSP52788 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMSP52788 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SMSP52788 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMSP52788 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.24■□□□□ 0.35
SMSP52788 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMSP52788 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMSP52788 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMSP52788 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.24■□□□□ 0.35
SMSP52788 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMSP52788 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.24■□□□□ 0.35
SMSP52788 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMSP52788 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SMSP52788 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.24■□□□□ 0.35
SMSP52788 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
SMSP52788 AL031133.1-201ENST00000406807 723 ntBASIC17.24■□□□□ 0.35
SMSP52788 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.24■□□□□ 0.35
SMSP52788 ISCU-203ENST00000431221 799 ntTSL 2 BASIC17.24■□□□□ 0.35
SMSP52788 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMSP52788 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SMSP52788 KRT18P56-201ENST00000507275 550 ntBASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms