Protein–RNA interactions for Protein: P49643

PRIM2, DNA primase large subunit, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM2P49643 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PRIM2P49643 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
PRIM2P49643 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PRIM2P49643 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PRIM2P49643 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
PRIM2P49643 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.55■□□□□ 0.4
PRIM2P49643 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PRIM2P49643 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PRIM2P49643 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.55■□□□□ 0.4
PRIM2P49643 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PRIM2P49643 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
PRIM2P49643 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PRIM2P49643 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.55■□□□□ 0.4
PRIM2P49643 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.55■□□□□ 0.4
PRIM2P49643 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.55■□□□□ 0.4
PRIM2P49643 AL499627.1-201ENST00000569373 2188 ntBASIC17.55■□□□□ 0.4
PRIM2P49643 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PRIM2P49643 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PRIM2P49643 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
PRIM2P49643 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.54■□□□□ 0.4
PRIM2P49643 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.54■□□□□ 0.4
PRIM2P49643 AC096733.2-201ENST00000609937 1394 ntBASIC17.54■□□□□ 0.4
PRIM2P49643 AL133373.2-201ENST00000623187 2828 ntBASIC17.54■□□□□ 0.4
PRIM2P49643 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PRIM2P49643 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PRIM2P49643 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
PRIM2P49643 AL162741.1-201ENST00000565563 1558 ntBASIC17.54■□□□□ 0.4
PRIM2P49643 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.54■□□□□ 0.4
PRIM2P49643 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.54■□□□□ 0.4
PRIM2P49643 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PRIM2P49643 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PRIM2P49643 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PRIM2P49643 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
PRIM2P49643 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PRIM2P49643 AC008550.1-201ENST00000511500 884 ntBASIC17.54■□□□□ 0.4
PRIM2P49643 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.54■□□□□ 0.4
PRIM2P49643 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.54■□□□□ 0.4
PRIM2P49643 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.54■□□□□ 0.4
PRIM2P49643 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.54■□□□□ 0.4
PRIM2P49643 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PRIM2P49643 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
PRIM2P49643 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PRIM2P49643 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PRIM2P49643 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
PRIM2P49643 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PRIM2P49643 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
PRIM2P49643 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.54■□□□□ 0.4
PRIM2P49643 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PRIM2P49643 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PRIM2P49643 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PRIM2P49643 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PRIM2P49643 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC17.53■□□□□ 0.4
PRIM2P49643 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PRIM2P49643 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PRIM2P49643 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
PRIM2P49643 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.53■□□□□ 0.4
PRIM2P49643 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.53■□□□□ 0.4
PRIM2P49643 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
PRIM2P49643 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PRIM2P49643 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PRIM2P49643 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
PRIM2P49643 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PRIM2P49643 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PRIM2P49643 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PRIM2P49643 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PRIM2P49643 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PRIM2P49643 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PRIM2P49643 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PRIM2P49643 MFAP1P1-201ENST00000442257 1255 ntBASIC17.53■□□□□ 0.4
PRIM2P49643 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC17.53■□□□□ 0.4
PRIM2P49643 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.53■□□□□ 0.4
PRIM2P49643 AC097488.1-201ENST00000507834 756 ntBASIC17.53■□□□□ 0.4
PRIM2P49643 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC17.53■□□□□ 0.4
PRIM2P49643 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.53■□□□□ 0.4
PRIM2P49643 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.53■□□□□ 0.4
PRIM2P49643 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.53■□□□□ 0.4
PRIM2P49643 AC026471.5-201ENST00000615068 467 ntBASIC17.53■□□□□ 0.4
PRIM2P49643 AP006294.2-201ENST00000641667 209 ntBASIC17.53■□□□□ 0.4
PRIM2P49643 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PRIM2P49643 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.53■□□□□ 0.4
PRIM2P49643 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PRIM2P49643 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
PRIM2P49643 AC112777.1-201ENST00000540175 1423 ntBASIC17.53■□□□□ 0.4
PRIM2P49643 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.53■□□□□ 0.4
PRIM2P49643 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PRIM2P49643 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PRIM2P49643 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PRIM2P49643 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.52■□□□□ 0.4
PRIM2P49643 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PRIM2P49643 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.52■□□□□ 0.4
PRIM2P49643 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.52■□□□□ 0.4
PRIM2P49643 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PRIM2P49643 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
PRIM2P49643 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PRIM2P49643 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PRIM2P49643 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC17.52■□□□□ 0.4
PRIM2P49643 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC17.52■□□□□ 0.4
PRIM2P49643 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC17.52■□□□□ 0.4
PRIM2P49643 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
PRIM2P49643 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms