Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SOX2P48431 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SOX2P48431 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SOX2P48431 KRASP1-201ENST00000407852 552 ntBASIC16.24■□□□□ 0.19
SOX2P48431 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC16.24■□□□□ 0.19
SOX2P48431 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
SOX2P48431 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SOX2P48431 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC16.24■□□□□ 0.19
SOX2P48431 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC16.24■□□□□ 0.19
SOX2P48431 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SOX2P48431 AL023875.1-201ENST00000640777 796 ntBASIC16.24■□□□□ 0.19
SOX2P48431 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
SOX2P48431 KRT8P45-201ENST00000414328 1447 ntBASIC16.24■□□□□ 0.19
SOX2P48431 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC16.24■□□□□ 0.19
SOX2P48431 GNAS-203ENST00000306120 1878 ntBASIC16.24■□□□□ 0.19
SOX2P48431 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SOX2P48431 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SOX2P48431 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.24■□□□□ 0.19
SOX2P48431 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16.24■□□□□ 0.19
SOX2P48431 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SOX2P48431 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
SOX2P48431 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SOX2P48431 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
SOX2P48431 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
SOX2P48431 PODN-203ENST00000395871 2744 ntTSL 5 BASIC16.24■□□□□ 0.19
SOX2P48431 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.23■□□□□ 0.19
SOX2P48431 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
SOX2P48431 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SOX2P48431 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SOX2P48431 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC16.23■□□□□ 0.19
SOX2P48431 AC020916.1-201ENST00000587762 1774 ntBASIC16.23■□□□□ 0.19
SOX2P48431 OR6D1P-203ENST00000641209 4860 ntBASIC16.23■□□□□ 0.19
SOX2P48431 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC16.23■□□□□ 0.19
SOX2P48431 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.23■□□□□ 0.19
SOX2P48431 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SOX2P48431 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.23■□□□□ 0.19
SOX2P48431 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.23■□□□□ 0.19
SOX2P48431 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SOX2P48431 KRT17P3-201ENST00000420566 1262 ntBASIC16.23■□□□□ 0.19
SOX2P48431 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SOX2P48431 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
SOX2P48431 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SOX2P48431 AC233263.1-201ENST00000578059 224 ntBASIC16.23■□□□□ 0.19
SOX2P48431 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC16.23■□□□□ 0.19
SOX2P48431 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.23■□□□□ 0.19
SOX2P48431 AC069544.1-201ENST00000609399 999 ntBASIC16.23■□□□□ 0.19
SOX2P48431 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.23■□□□□ 0.19
SOX2P48431 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC16.23■□□□□ 0.19
SOX2P48431 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC16.23■□□□□ 0.19
SOX2P48431 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
SOX2P48431 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
SOX2P48431 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.23■□□□□ 0.19
SOX2P48431 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SOX2P48431 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
SOX2P48431 AC138028.4-201ENST00000564984 1845 ntBASIC16.23■□□□□ 0.19
SOX2P48431 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SOX2P48431 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SOX2P48431 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.23■□□□□ 0.19
SOX2P48431 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SOX2P48431 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SOX2P48431 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SOX2P48431 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SOX2P48431 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SOX2P48431 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SOX2P48431 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC16.23■□□□□ 0.19
SOX2P48431 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SOX2P48431 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SOX2P48431 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SOX2P48431 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SOX2P48431 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SOX2P48431 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
SOX2P48431 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SOX2P48431 LINC00896-202ENST00000609602 2128 ntBASIC16.22■□□□□ 0.19
SOX2P48431 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
SOX2P48431 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
SOX2P48431 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC16.22■□□□□ 0.19
SOX2P48431 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SOX2P48431 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SOX2P48431 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.22■□□□□ 0.19
SOX2P48431 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SOX2P48431 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
SOX2P48431 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
SOX2P48431 MIR935-201ENST00000401179 91 ntBASIC16.22■□□□□ 0.19
SOX2P48431 AC239809.2-201ENST00000415381 517 ntBASIC16.22■□□□□ 0.19
SOX2P48431 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
SOX2P48431 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SOX2P48431 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
SOX2P48431 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC16.22■□□□□ 0.19
SOX2P48431 GLRB-205ENST00000512619 728 ntTSL 3 BASIC16.22■□□□□ 0.19
SOX2P48431 PRSS44-201ENST00000515154 1146 ntBASIC16.22■□□□□ 0.19
SOX2P48431 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC16.22■□□□□ 0.19
SOX2P48431 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SOX2P48431 AP003097.1-201ENST00000530657 1135 ntBASIC16.22■□□□□ 0.19
SOX2P48431 AC142086.2-201ENST00000569753 217 ntBASIC16.22■□□□□ 0.19
SOX2P48431 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC16.22■□□□□ 0.19
SOX2P48431 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC16.22■□□□□ 0.19
SOX2P48431 AC104771.1-201ENST00000603335 964 ntBASIC16.22■□□□□ 0.19
SOX2P48431 AC131212.4-201ENST00000623606 975 ntBASIC16.22■□□□□ 0.19
SOX2P48431 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC16.22■□□□□ 0.19
SOX2P48431 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms