Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SSR1P43307 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SSR1P43307 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SSR1P43307 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
SSR1P43307 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SSR1P43307 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SSR1P43307 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SSR1P43307 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SSR1P43307 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
SSR1P43307 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC19.59■□□□□ 0.73
SSR1P43307 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC19.59■□□□□ 0.73
SSR1P43307 FDX2-206ENST00000492239 773 ntTSL 2 BASIC19.59■□□□□ 0.73
SSR1P43307 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC19.59■□□□□ 0.73
SSR1P43307 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SSR1P43307 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.59■□□□□ 0.73
SSR1P43307 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.59■□□□□ 0.73
SSR1P43307 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.59■□□□□ 0.73
SSR1P43307 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.59■□□□□ 0.73
SSR1P43307 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SSR1P43307 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
SSR1P43307 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SSR1P43307 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.59■□□□□ 0.73
SSR1P43307 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC19.59■□□□□ 0.73
SSR1P43307 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SSR1P43307 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SSR1P43307 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SSR1P43307 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SSR1P43307 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC19.59■□□□□ 0.73
SSR1P43307 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.58■□□□□ 0.73
SSR1P43307 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
SSR1P43307 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
SSR1P43307 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SSR1P43307 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
SSR1P43307 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SSR1P43307 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
SSR1P43307 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SSR1P43307 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC19.58■□□□□ 0.73
SSR1P43307 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
SSR1P43307 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SSR1P43307 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SSR1P43307 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SSR1P43307 CRYGFP-201ENST00000418459 633 ntBASIC19.58■□□□□ 0.72
SSR1P43307 AC012618.2-201ENST00000428058 849 ntBASIC19.58■□□□□ 0.72
SSR1P43307 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SSR1P43307 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SSR1P43307 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.58■□□□□ 0.72
SSR1P43307 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
SSR1P43307 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC19.58■□□□□ 0.72
SSR1P43307 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC19.58■□□□□ 0.72
SSR1P43307 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.58■□□□□ 0.72
SSR1P43307 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SSR1P43307 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SSR1P43307 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SSR1P43307 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SSR1P43307 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.58■□□□□ 0.72
SSR1P43307 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
SSR1P43307 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
SSR1P43307 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC19.58■□□□□ 0.72
SSR1P43307 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
SSR1P43307 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
SSR1P43307 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SSR1P43307 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
SSR1P43307 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
SSR1P43307 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
SSR1P43307 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SSR1P43307 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SSR1P43307 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC19.57■□□□□ 0.72
SSR1P43307 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
SSR1P43307 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SSR1P43307 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SSR1P43307 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.57■□□□□ 0.72
SSR1P43307 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SSR1P43307 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SSR1P43307 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC19.57■□□□□ 0.72
SSR1P43307 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
SSR1P43307 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
SSR1P43307 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
SSR1P43307 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.57■□□□□ 0.72
SSR1P43307 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC19.57■□□□□ 0.72
SSR1P43307 AC233702.5-201ENST00000584107 538 ntBASIC19.57■□□□□ 0.72
SSR1P43307 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC19.57■□□□□ 0.72
SSR1P43307 USP36-216ENST00000589424 970 ntTSL 5 BASIC19.57■□□□□ 0.72
SSR1P43307 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.57■□□□□ 0.72
SSR1P43307 MYC-208ENST00000641036 567 ntBASIC19.57■□□□□ 0.72
SSR1P43307 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SSR1P43307 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
SSR1P43307 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19.57■□□□□ 0.72
SSR1P43307 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC19.57■□□□□ 0.72
SSR1P43307 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SSR1P43307 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SSR1P43307 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
SSR1P43307 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
SSR1P43307 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.57■□□□□ 0.72
SSR1P43307 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
SSR1P43307 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SSR1P43307 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC19.57■□□□□ 0.72
SSR1P43307 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
SSR1P43307 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
SSR1P43307 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
SSR1P43307 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms