Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC18.54■□□□□ 0.56
CCNFP41002 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.54■□□□□ 0.56
CCNFP41002 AP005242.2-201ENST00000580065 1175 ntBASIC18.54■□□□□ 0.56
CCNFP41002 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.54■□□□□ 0.56
CCNFP41002 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.54■□□□□ 0.56
CCNFP41002 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCNFP41002 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCNFP41002 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCNFP41002 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCNFP41002 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.54■□□□□ 0.56
CCNFP41002 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCNFP41002 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.54■□□□□ 0.56
CCNFP41002 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
CCNFP41002 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
CCNFP41002 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.54■□□□□ 0.56
CCNFP41002 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCNFP41002 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.54■□□□□ 0.56
CCNFP41002 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCNFP41002 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.54■□□□□ 0.56
CCNFP41002 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.54■□□□□ 0.56
CCNFP41002 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CCNFP41002 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCNFP41002 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCNFP41002 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.53■□□□□ 0.56
CCNFP41002 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CCNFP41002 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCNFP41002 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CCNFP41002 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.53■□□□□ 0.56
CCNFP41002 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCNFP41002 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCNFP41002 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCNFP41002 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.53■□□□□ 0.56
CCNFP41002 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC18.53■□□□□ 0.56
CCNFP41002 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.53■□□□□ 0.56
CCNFP41002 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC18.53■□□□□ 0.56
CCNFP41002 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCNFP41002 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.53■□□□□ 0.56
CCNFP41002 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.53■□□□□ 0.56
CCNFP41002 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CCNFP41002 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
CCNFP41002 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCNFP41002 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCNFP41002 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CCNFP41002 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.53■□□□□ 0.56
CCNFP41002 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CCNFP41002 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.52■□□□□ 0.56
CCNFP41002 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCNFP41002 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CCNFP41002 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCNFP41002 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCNFP41002 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCNFP41002 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
CCNFP41002 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCNFP41002 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCNFP41002 AL596275.1-201ENST00000423464 877 ntBASIC18.52■□□□□ 0.56
CCNFP41002 MFAP1P1-201ENST00000442257 1255 ntBASIC18.52■□□□□ 0.56
CCNFP41002 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CCNFP41002 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.52■□□□□ 0.56
CCNFP41002 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC18.52■□□□□ 0.56
CCNFP41002 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
CCNFP41002 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
CCNFP41002 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCNFP41002 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCNFP41002 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCNFP41002 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.52■□□□□ 0.56
CCNFP41002 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CCNFP41002 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.52■□□□□ 0.55
CCNFP41002 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
CCNFP41002 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.52■□□□□ 0.55
CCNFP41002 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCNFP41002 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CCNFP41002 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.51■□□□□ 0.55
CCNFP41002 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
CCNFP41002 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CCNFP41002 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCNFP41002 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCNFP41002 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCNFP41002 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.51■□□□□ 0.55
CCNFP41002 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
CCNFP41002 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.51■□□□□ 0.55
CCNFP41002 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCNFP41002 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCNFP41002 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCNFP41002 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCNFP41002 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CCNFP41002 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.51■□□□□ 0.55
CCNFP41002 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.51■□□□□ 0.55
CCNFP41002 KRT18P41-201ENST00000518924 1277 ntBASIC18.51■□□□□ 0.55
CCNFP41002 AL355075.4-201ENST00000554988 638 ntBASIC18.51■□□□□ 0.55
CCNFP41002 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC18.51■□□□□ 0.55
CCNFP41002 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC18.51■□□□□ 0.55
CCNFP41002 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC18.51■□□□□ 0.55
CCNFP41002 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCNFP41002 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCNFP41002 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCNFP41002 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
CCNFP41002 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
CCNFP41002 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
CCNFP41002 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCNFP41002 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms