Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
LSP1P33241 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
LSP1P33241 AC026271.2-201ENST00000428091 497 ntBASIC18.49■□□□□ 0.55
LSP1P33241 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.49■□□□□ 0.55
LSP1P33241 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LSP1P33241 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LSP1P33241 KRT18P16-201ENST00000510337 1294 ntBASIC18.49■□□□□ 0.55
LSP1P33241 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LSP1P33241 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.49■□□□□ 0.55
LSP1P33241 AC087623.3-201ENST00000607047 1098 ntBASIC18.49■□□□□ 0.55
LSP1P33241 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LSP1P33241 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LSP1P33241 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.49■□□□□ 0.55
LSP1P33241 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LSP1P33241 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LSP1P33241 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LSP1P33241 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC18.49■□□□□ 0.55
LSP1P33241 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
LSP1P33241 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LSP1P33241 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
LSP1P33241 KRT17P1-201ENST00000399211 1546 ntBASIC18.49■□□□□ 0.55
LSP1P33241 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
LSP1P33241 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LSP1P33241 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LSP1P33241 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LSP1P33241 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LSP1P33241 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LSP1P33241 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.48■□□□□ 0.55
LSP1P33241 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LSP1P33241 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
LSP1P33241 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC18.48■□□□□ 0.55
LSP1P33241 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LSP1P33241 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LSP1P33241 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC18.48■□□□□ 0.55
LSP1P33241 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
LSP1P33241 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
LSP1P33241 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LSP1P33241 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC18.48■□□□□ 0.55
LSP1P33241 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LSP1P33241 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
LSP1P33241 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
LSP1P33241 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LSP1P33241 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC18.48■□□□□ 0.55
LSP1P33241 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.48■□□□□ 0.55
LSP1P33241 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LSP1P33241 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LSP1P33241 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC18.48■□□□□ 0.55
LSP1P33241 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
LSP1P33241 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
LSP1P33241 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC18.48■□□□□ 0.55
LSP1P33241 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LSP1P33241 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LSP1P33241 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC18.47■□□□□ 0.55
LSP1P33241 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
LSP1P33241 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LSP1P33241 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC18.47■□□□□ 0.55
LSP1P33241 KRT8P32-201ENST00000512863 1461 ntBASIC18.47■□□□□ 0.55
LSP1P33241 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LSP1P33241 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.47■□□□□ 0.55
LSP1P33241 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC18.47■□□□□ 0.55
LSP1P33241 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
LSP1P33241 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LSP1P33241 AC073210.2-201ENST00000430369 194 ntBASIC18.47■□□□□ 0.55
LSP1P33241 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LSP1P33241 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC18.47■□□□□ 0.55
LSP1P33241 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.47■□□□□ 0.55
LSP1P33241 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LSP1P33241 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC18.47■□□□□ 0.55
LSP1P33241 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC18.47■□□□□ 0.55
LSP1P33241 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.47■□□□□ 0.55
LSP1P33241 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LSP1P33241 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
LSP1P33241 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC18.47■□□□□ 0.55
LSP1P33241 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LSP1P33241 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.47■□□□□ 0.55
LSP1P33241 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC18.47■□□□□ 0.55
LSP1P33241 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC18.47■□□□□ 0.55
LSP1P33241 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC18.47■□□□□ 0.55
LSP1P33241 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LSP1P33241 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
LSP1P33241 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LSP1P33241 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.46■□□□□ 0.55
LSP1P33241 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LSP1P33241 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LSP1P33241 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LSP1P33241 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
LSP1P33241 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
LSP1P33241 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LSP1P33241 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
LSP1P33241 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LSP1P33241 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LSP1P33241 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
LSP1P33241 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
LSP1P33241 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
LSP1P33241 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
LSP1P33241 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LSP1P33241 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LSP1P33241 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC18.46■□□□□ 0.55
LSP1P33241 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LSP1P33241 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms