Protein–RNA interactions for Protein: P28472

GABRB3, Gamma-aminobutyric acid receptor subunit beta-3, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3P28472 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC18.3■□□□□ 0.52
GABRB3P28472 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC18.3■□□□□ 0.52
GABRB3P28472 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
GABRB3P28472 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
GABRB3P28472 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
GABRB3P28472 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC18.3■□□□□ 0.52
GABRB3P28472 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC18.3■□□□□ 0.52
GABRB3P28472 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
GABRB3P28472 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
GABRB3P28472 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.3■□□□□ 0.52
GABRB3P28472 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
GABRB3P28472 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
GABRB3P28472 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
GABRB3P28472 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
GABRB3P28472 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
GABRB3P28472 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
GABRB3P28472 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
GABRB3P28472 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
GABRB3P28472 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
GABRB3P28472 TSPY14P-201ENST00000303979 915 ntBASIC18.29■□□□□ 0.52
GABRB3P28472 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
GABRB3P28472 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
GABRB3P28472 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
GABRB3P28472 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC18.29■□□□□ 0.52
GABRB3P28472 CCR12P-201ENST00000446203 998 ntBASIC18.29■□□□□ 0.52
GABRB3P28472 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC18.29■□□□□ 0.52
GABRB3P28472 BX088651.1-201ENST00000540551 451 ntBASIC18.29■□□□□ 0.52
GABRB3P28472 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC18.29■□□□□ 0.52
GABRB3P28472 MIR4497-201ENST00000583208 89 ntBASIC18.29■□□□□ 0.52
GABRB3P28472 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.29■□□□□ 0.52
GABRB3P28472 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC18.29■□□□□ 0.52
GABRB3P28472 AP006294.2-201ENST00000641667 209 ntBASIC18.29■□□□□ 0.52
GABRB3P28472 AC116562.4-202ENST00000641738 218 ntBASIC18.29■□□□□ 0.52
GABRB3P28472 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
GABRB3P28472 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
GABRB3P28472 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
GABRB3P28472 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
GABRB3P28472 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
GABRB3P28472 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.29■□□□□ 0.52
GABRB3P28472 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
GABRB3P28472 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.29■□□□□ 0.52
GABRB3P28472 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
GABRB3P28472 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.29■□□□□ 0.52
GABRB3P28472 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
GABRB3P28472 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
GABRB3P28472 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
GABRB3P28472 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
GABRB3P28472 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
GABRB3P28472 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
GABRB3P28472 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
GABRB3P28472 KRT17P2-201ENST00000300992 1314 ntBASIC18.28■□□□□ 0.52
GABRB3P28472 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
GABRB3P28472 AC009102.3-201ENST00000623118 1491 ntBASIC18.28■□□□□ 0.52
GABRB3P28472 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.28■□□□□ 0.52
GABRB3P28472 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
GABRB3P28472 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.28■□□□□ 0.52
GABRB3P28472 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
GABRB3P28472 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.28■□□□□ 0.52
GABRB3P28472 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
GABRB3P28472 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
GABRB3P28472 MIR149-201ENST00000384879 89 ntBASIC18.28■□□□□ 0.52
GABRB3P28472 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.28■□□□□ 0.52
GABRB3P28472 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.28■□□□□ 0.52
GABRB3P28472 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
GABRB3P28472 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC18.28■□□□□ 0.52
GABRB3P28472 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC18.28■□□□□ 0.52
GABRB3P28472 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
GABRB3P28472 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
GABRB3P28472 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC18.28■□□□□ 0.52
GABRB3P28472 KRT8P7-201ENST00000533003 1432 ntBASIC18.28■□□□□ 0.52
GABRB3P28472 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
GABRB3P28472 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
GABRB3P28472 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.28■□□□□ 0.52
GABRB3P28472 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.28■□□□□ 0.52
GABRB3P28472 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
GABRB3P28472 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
GABRB3P28472 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
GABRB3P28472 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.28■□□□□ 0.52
GABRB3P28472 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.28■□□□□ 0.52
GABRB3P28472 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
GABRB3P28472 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
GABRB3P28472 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.28■□□□□ 0.52
GABRB3P28472 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.28■□□□□ 0.52
GABRB3P28472 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
GABRB3P28472 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
GABRB3P28472 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.27■□□□□ 0.52
GABRB3P28472 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
GABRB3P28472 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
GABRB3P28472 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.27■□□□□ 0.52
GABRB3P28472 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.27■□□□□ 0.52
GABRB3P28472 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
GABRB3P28472 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
GABRB3P28472 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
GABRB3P28472 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
GABRB3P28472 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
GABRB3P28472 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
GABRB3P28472 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC18.27■□□□□ 0.52
GABRB3P28472 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.27■□□□□ 0.52
GABRB3P28472 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
GABRB3P28472 AC010947.1-201ENST00000623454 693 ntBASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms