Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HLA-DPA1P20036 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
HLA-DPA1P20036 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HLA-DPA1P20036 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
HLA-DPA1P20036 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
HLA-DPA1P20036 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.6■□□□□ 0.57
HLA-DPA1P20036 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
HLA-DPA1P20036 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HLA-DPA1P20036 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
HLA-DPA1P20036 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HLA-DPA1P20036 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HLA-DPA1P20036 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HLA-DPA1P20036 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HLA-DPA1P20036 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HLA-DPA1P20036 AC009102.3-201ENST00000623118 1491 ntBASIC18.59■□□□□ 0.57
HLA-DPA1P20036 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
HLA-DPA1P20036 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HLA-DPA1P20036 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HLA-DPA1P20036 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HLA-DPA1P20036 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
HLA-DPA1P20036 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HLA-DPA1P20036 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.59■□□□□ 0.57
HLA-DPA1P20036 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.59■□□□□ 0.57
HLA-DPA1P20036 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
HLA-DPA1P20036 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HLA-DPA1P20036 AC113347.1-201ENST00000413321 391 ntBASIC18.59■□□□□ 0.57
HLA-DPA1P20036 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HLA-DPA1P20036 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.59■□□□□ 0.57
HLA-DPA1P20036 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.59■□□□□ 0.57
HLA-DPA1P20036 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.59■□□□□ 0.57
HLA-DPA1P20036 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
HLA-DPA1P20036 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.59■□□□□ 0.57
HLA-DPA1P20036 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.59■□□□□ 0.57
HLA-DPA1P20036 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HLA-DPA1P20036 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HLA-DPA1P20036 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HLA-DPA1P20036 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.59■□□□□ 0.57
HLA-DPA1P20036 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.59■□□□□ 0.57
HLA-DPA1P20036 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HLA-DPA1P20036 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.59■□□□□ 0.57
HLA-DPA1P20036 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.58■□□□□ 0.57
HLA-DPA1P20036 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
HLA-DPA1P20036 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
HLA-DPA1P20036 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
HLA-DPA1P20036 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
HLA-DPA1P20036 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.58■□□□□ 0.57
HLA-DPA1P20036 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.58■□□□□ 0.57
HLA-DPA1P20036 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
HLA-DPA1P20036 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
HLA-DPA1P20036 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
HLA-DPA1P20036 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.58■□□□□ 0.56
HLA-DPA1P20036 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
HLA-DPA1P20036 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC18.58■□□□□ 0.56
HLA-DPA1P20036 ATP5G1P1-201ENST00000448724 379 ntBASIC18.58■□□□□ 0.56
HLA-DPA1P20036 SEC1P-202ENST00000473944 940 ntBASIC18.58■□□□□ 0.56
HLA-DPA1P20036 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.58■□□□□ 0.56
HLA-DPA1P20036 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC18.58■□□□□ 0.56
HLA-DPA1P20036 AC010240.3-201ENST00000607688 395 ntBASIC18.58■□□□□ 0.56
HLA-DPA1P20036 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
HLA-DPA1P20036 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC18.58■□□□□ 0.56
HLA-DPA1P20036 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
HLA-DPA1P20036 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
HLA-DPA1P20036 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
HLA-DPA1P20036 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.58■□□□□ 0.56
HLA-DPA1P20036 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.58■□□□□ 0.56
HLA-DPA1P20036 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HLA-DPA1P20036 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.58■□□□□ 0.56
HLA-DPA1P20036 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC18.58■□□□□ 0.56
HLA-DPA1P20036 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
HLA-DPA1P20036 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
HLA-DPA1P20036 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.57■□□□□ 0.56
HLA-DPA1P20036 BICD1-207ENST00000551848 1962 ntBASIC18.57■□□□□ 0.56
HLA-DPA1P20036 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.57■□□□□ 0.56
HLA-DPA1P20036 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC18.57■□□□□ 0.56
HLA-DPA1P20036 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HLA-DPA1P20036 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HLA-DPA1P20036 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HLA-DPA1P20036 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HLA-DPA1P20036 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
HLA-DPA1P20036 AC010203.1-204ENST00000548782 407 ntBASIC18.57■□□□□ 0.56
HLA-DPA1P20036 AC024243.1-201ENST00000609234 778 ntBASIC18.57■□□□□ 0.56
HLA-DPA1P20036 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC18.57■□□□□ 0.56
HLA-DPA1P20036 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HLA-DPA1P20036 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HLA-DPA1P20036 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HLA-DPA1P20036 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HLA-DPA1P20036 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
HLA-DPA1P20036 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.57■□□□□ 0.56
HLA-DPA1P20036 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HLA-DPA1P20036 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
HLA-DPA1P20036 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HLA-DPA1P20036 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HLA-DPA1P20036 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HLA-DPA1P20036 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
HLA-DPA1P20036 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
HLA-DPA1P20036 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.56■□□□□ 0.56
HLA-DPA1P20036 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
HLA-DPA1P20036 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
HLA-DPA1P20036 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
HLA-DPA1P20036 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms