Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
UBCP0CG48 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC16.17■□□□□ 0.18
UBCP0CG48 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
UBCP0CG48 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.17■□□□□ 0.18
UBCP0CG48 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
UBCP0CG48 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
UBCP0CG48 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
UBCP0CG48 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
UBCP0CG48 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
UBCP0CG48 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.17■□□□□ 0.18
UBCP0CG48 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
UBCP0CG48 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
UBCP0CG48 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
UBCP0CG48 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC16.17■□□□□ 0.18
UBCP0CG48 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC16.17■□□□□ 0.18
UBCP0CG48 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC16.17■□□□□ 0.18
UBCP0CG48 RARRES2P10-201ENST00000564312 460 ntBASIC16.17■□□□□ 0.18
UBCP0CG48 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
UBCP0CG48 AC130371.2-201ENST00000619443 611 ntBASIC16.17■□□□□ 0.18
UBCP0CG48 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
UBCP0CG48 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC16.17■□□□□ 0.18
UBCP0CG48 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
UBCP0CG48 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
UBCP0CG48 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.17■□□□□ 0.18
UBCP0CG48 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC16.17■□□□□ 0.18
UBCP0CG48 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
UBCP0CG48 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
UBCP0CG48 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
UBCP0CG48 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
UBCP0CG48 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
UBCP0CG48 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
UBCP0CG48 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
UBCP0CG48 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
UBCP0CG48 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
UBCP0CG48 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
UBCP0CG48 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
UBCP0CG48 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
UBCP0CG48 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
UBCP0CG48 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
UBCP0CG48 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
UBCP0CG48 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.16■□□□□ 0.18
UBCP0CG48 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
UBCP0CG48 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
UBCP0CG48 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
UBCP0CG48 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
UBCP0CG48 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
UBCP0CG48 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
UBCP0CG48 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC16.16■□□□□ 0.18
UBCP0CG48 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
UBCP0CG48 SLC25A6P5-201ENST00000435663 894 ntBASIC16.16■□□□□ 0.18
UBCP0CG48 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
UBCP0CG48 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC16.16■□□□□ 0.18
UBCP0CG48 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC16.16■□□□□ 0.18
UBCP0CG48 C1QBPP2-201ENST00000528754 825 ntBASIC16.16■□□□□ 0.18
UBCP0CG48 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
UBCP0CG48 CFL2-205ENST00000555765 632 ntTSL 2 BASIC16.16■□□□□ 0.18
UBCP0CG48 AF186192.3-201ENST00000583427 947 ntBASIC16.16■□□□□ 0.18
UBCP0CG48 MIR6786-201ENST00000616843 113 ntBASIC16.16■□□□□ 0.18
UBCP0CG48 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
UBCP0CG48 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
UBCP0CG48 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
UBCP0CG48 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
UBCP0CG48 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.16■□□□□ 0.18
UBCP0CG48 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
UBCP0CG48 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
UBCP0CG48 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
UBCP0CG48 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.16■□□□□ 0.18
UBCP0CG48 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC16.16■□□□□ 0.18
UBCP0CG48 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
UBCP0CG48 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
UBCP0CG48 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
UBCP0CG48 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
UBCP0CG48 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC16.16■□□□□ 0.18
UBCP0CG48 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC16.15■□□□□ 0.18
UBCP0CG48 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
UBCP0CG48 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
UBCP0CG48 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
UBCP0CG48 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
UBCP0CG48 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
UBCP0CG48 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC16.15■□□□□ 0.18
UBCP0CG48 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16.15■□□□□ 0.18
UBCP0CG48 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
UBCP0CG48 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
UBCP0CG48 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC16.15■□□□□ 0.18
UBCP0CG48 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.15■□□□□ 0.18
UBCP0CG48 AC128676.1-201ENST00000454392 318 ntBASIC16.15■□□□□ 0.18
UBCP0CG48 B3GAT3P1-201ENST00000471720 806 ntBASIC16.15■□□□□ 0.18
UBCP0CG48 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC16.15■□□□□ 0.18
UBCP0CG48 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
UBCP0CG48 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC16.15■□□□□ 0.18
UBCP0CG48 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC16.15■□□□□ 0.18
UBCP0CG48 RPS15-203ENST00000586096 570 ntTSL 2 BASIC16.15■□□□□ 0.18
UBCP0CG48 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.15■□□□□ 0.18
UBCP0CG48 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
UBCP0CG48 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC16.15■□□□□ 0.18
UBCP0CG48 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
UBCP0CG48 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
UBCP0CG48 FSCN1P1-201ENST00000568912 1481 ntBASIC16.15■□□□□ 0.18
UBCP0CG48 AC138028.4-201ENST00000564984 1845 ntBASIC16.15■□□□□ 0.18
UBCP0CG48 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.14■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms