Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
HMGN1P05114 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
HMGN1P05114 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HMGN1P05114 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
HMGN1P05114 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HMGN1P05114 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
HMGN1P05114 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
HMGN1P05114 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.26
HMGN1P05114 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.26
HMGN1P05114 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
HMGN1P05114 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.7■□□□□ 0.26
HMGN1P05114 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HMGN1P05114 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HMGN1P05114 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HMGN1P05114 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.7■□□□□ 0.26
HMGN1P05114 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.7■□□□□ 0.26
HMGN1P05114 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
HMGN1P05114 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
HMGN1P05114 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
HMGN1P05114 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HMGN1P05114 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC16.7■□□□□ 0.26
HMGN1P05114 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC16.7■□□□□ 0.26
HMGN1P05114 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HMGN1P05114 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HMGN1P05114 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HMGN1P05114 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
HMGN1P05114 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HMGN1P05114 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HMGN1P05114 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC16.7■□□□□ 0.26
HMGN1P05114 CFL2-205ENST00000555765 632 ntTSL 2 BASIC16.7■□□□□ 0.26
HMGN1P05114 CKBP1-201ENST00000565489 1086 ntBASIC16.7■□□□□ 0.26
HMGN1P05114 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
HMGN1P05114 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HMGN1P05114 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC16.7■□□□□ 0.26
HMGN1P05114 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.7■□□□□ 0.26
HMGN1P05114 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HMGN1P05114 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.7■□□□□ 0.26
HMGN1P05114 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.7■□□□□ 0.26
HMGN1P05114 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
HMGN1P05114 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC16.7■□□□□ 0.26
HMGN1P05114 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HMGN1P05114 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
HMGN1P05114 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.7■□□□□ 0.26
HMGN1P05114 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
HMGN1P05114 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HMGN1P05114 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HMGN1P05114 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
HMGN1P05114 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.69■□□□□ 0.26
HMGN1P05114 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
HMGN1P05114 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.69■□□□□ 0.26
HMGN1P05114 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HMGN1P05114 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HMGN1P05114 LINC00896-202ENST00000609602 2128 ntBASIC16.69■□□□□ 0.26
HMGN1P05114 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.69■□□□□ 0.26
HMGN1P05114 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HMGN1P05114 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
HMGN1P05114 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
HMGN1P05114 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC16.69■□□□□ 0.26
HMGN1P05114 SERF2-207ENST00000409614 582 ntTSL 2 BASIC16.69■□□□□ 0.26
HMGN1P05114 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC16.69■□□□□ 0.26
HMGN1P05114 AC233263.1-201ENST00000578059 224 ntBASIC16.69■□□□□ 0.26
HMGN1P05114 AC124016.1-201ENST00000609552 612 ntBASIC16.69■□□□□ 0.26
HMGN1P05114 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
HMGN1P05114 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
HMGN1P05114 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
HMGN1P05114 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.69■□□□□ 0.26
HMGN1P05114 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.69■□□□□ 0.26
HMGN1P05114 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HMGN1P05114 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
HMGN1P05114 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
HMGN1P05114 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
HMGN1P05114 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HMGN1P05114 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
HMGN1P05114 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HMGN1P05114 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HMGN1P05114 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HMGN1P05114 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
HMGN1P05114 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HMGN1P05114 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HMGN1P05114 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
HMGN1P05114 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HMGN1P05114 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.68■□□□□ 0.26
HMGN1P05114 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.68■□□□□ 0.26
HMGN1P05114 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
HMGN1P05114 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC16.68■□□□□ 0.26
HMGN1P05114 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HMGN1P05114 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
HMGN1P05114 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HMGN1P05114 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
HMGN1P05114 RNA5SP413-201ENST00000516373 109 ntBASIC16.68■□□□□ 0.26
HMGN1P05114 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC16.68■□□□□ 0.26
HMGN1P05114 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
HMGN1P05114 AC011298.2-201ENST00000617989 482 ntBASIC16.68■□□□□ 0.26
HMGN1P05114 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HMGN1P05114 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HMGN1P05114 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.68■□□□□ 0.26
HMGN1P05114 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HMGN1P05114 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HMGN1P05114 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
HMGN1P05114 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms