Protein–RNA interactions for Protein: P04350

TUBB4A, Tubulin beta-4A chain, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4AP04350 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
TUBB4AP04350 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TUBB4AP04350 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TUBB4AP04350 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC19.75■□□□□ 0.75
TUBB4AP04350 HTR7P1-201ENST00000538670 1336 ntBASIC19.75■□□□□ 0.75
TUBB4AP04350 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TUBB4AP04350 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TUBB4AP04350 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
TUBB4AP04350 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TUBB4AP04350 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TUBB4AP04350 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
TUBB4AP04350 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC19.74■□□□□ 0.75
TUBB4AP04350 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
TUBB4AP04350 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TUBB4AP04350 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TUBB4AP04350 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.74■□□□□ 0.75
TUBB4AP04350 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.74■□□□□ 0.75
TUBB4AP04350 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC19.74■□□□□ 0.75
TUBB4AP04350 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC19.74■□□□□ 0.75
TUBB4AP04350 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.74■□□□□ 0.75
TUBB4AP04350 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
TUBB4AP04350 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TUBB4AP04350 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TUBB4AP04350 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TUBB4AP04350 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TUBB4AP04350 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
TUBB4AP04350 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
TUBB4AP04350 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
TUBB4AP04350 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TUBB4AP04350 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC19.74■□□□□ 0.75
TUBB4AP04350 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
TUBB4AP04350 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19.74■□□□□ 0.75
TUBB4AP04350 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.73■□□□□ 0.75
TUBB4AP04350 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TUBB4AP04350 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TUBB4AP04350 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TUBB4AP04350 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
TUBB4AP04350 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
TUBB4AP04350 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TUBB4AP04350 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
TUBB4AP04350 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TUBB4AP04350 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TUBB4AP04350 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
TUBB4AP04350 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.73■□□□□ 0.75
TUBB4AP04350 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TUBB4AP04350 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.73■□□□□ 0.75
TUBB4AP04350 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.73■□□□□ 0.75
TUBB4AP04350 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.73■□□□□ 0.75
TUBB4AP04350 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TUBB4AP04350 AL121829.2-201ENST00000620908 328 ntBASIC19.73■□□□□ 0.75
TUBB4AP04350 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC19.73■□□□□ 0.75
TUBB4AP04350 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TUBB4AP04350 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
TUBB4AP04350 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TUBB4AP04350 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TUBB4AP04350 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC19.73■□□□□ 0.75
TUBB4AP04350 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
TUBB4AP04350 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TUBB4AP04350 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC19.73■□□□□ 0.75
TUBB4AP04350 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
TUBB4AP04350 PHGDH-209ENST00000641074 1780 ntBASIC19.72■□□□□ 0.75
TUBB4AP04350 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TUBB4AP04350 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TUBB4AP04350 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TUBB4AP04350 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TUBB4AP04350 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TUBB4AP04350 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC19.72■□□□□ 0.75
TUBB4AP04350 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC19.72■□□□□ 0.75
TUBB4AP04350 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TUBB4AP04350 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TUBB4AP04350 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
TUBB4AP04350 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TUBB4AP04350 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
TUBB4AP04350 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC19.72■□□□□ 0.75
TUBB4AP04350 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.72■□□□□ 0.75
TUBB4AP04350 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC19.72■□□□□ 0.75
TUBB4AP04350 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC19.72■□□□□ 0.75
TUBB4AP04350 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC19.72■□□□□ 0.75
TUBB4AP04350 AC006557.6-201ENST00000623071 864 ntBASIC19.72■□□□□ 0.75
TUBB4AP04350 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TUBB4AP04350 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC19.72■□□□□ 0.75
TUBB4AP04350 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
TUBB4AP04350 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TUBB4AP04350 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TUBB4AP04350 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TUBB4AP04350 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TUBB4AP04350 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC19.72■□□□□ 0.75
TUBB4AP04350 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC19.72■□□□□ 0.75
TUBB4AP04350 LTF-203ENST00000426532 2494 ntTSL 2 BASIC19.71■□□□□ 0.75
TUBB4AP04350 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TUBB4AP04350 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
TUBB4AP04350 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TUBB4AP04350 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TUBB4AP04350 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TUBB4AP04350 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TUBB4AP04350 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TUBB4AP04350 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TUBB4AP04350 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
TUBB4AP04350 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TUBB4AP04350 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms