Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HLA-DQA1P01909 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
HLA-DQA1P01909 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
HLA-DQA1P01909 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
HLA-DQA1P01909 AL162727.3-201ENST00000635661 2787 ntBASIC13.87□□□□□ -0.19
HLA-DQA1P01909 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
HLA-DQA1P01909 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HLA-DQA1P01909 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HLA-DQA1P01909 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HLA-DQA1P01909 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
HLA-DQA1P01909 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HLA-DQA1P01909 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HLA-DQA1P01909 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HLA-DQA1P01909 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC13.87□□□□□ -0.19
HLA-DQA1P01909 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HLA-DQA1P01909 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HLA-DQA1P01909 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC13.87□□□□□ -0.19
HLA-DQA1P01909 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HLA-DQA1P01909 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HLA-DQA1P01909 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
HLA-DQA1P01909 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC13.87□□□□□ -0.19
HLA-DQA1P01909 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
HLA-DQA1P01909 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
HLA-DQA1P01909 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
HLA-DQA1P01909 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
HLA-DQA1P01909 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC13.87□□□□□ -0.19
HLA-DQA1P01909 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC13.87□□□□□ -0.19
HLA-DQA1P01909 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HLA-DQA1P01909 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
HLA-DQA1P01909 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC13.86□□□□□ -0.19
HLA-DQA1P01909 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
HLA-DQA1P01909 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
HLA-DQA1P01909 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HLA-DQA1P01909 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HLA-DQA1P01909 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
HLA-DQA1P01909 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
HLA-DQA1P01909 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
HLA-DQA1P01909 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HLA-DQA1P01909 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC13.86□□□□□ -0.19
HLA-DQA1P01909 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC13.86□□□□□ -0.19
HLA-DQA1P01909 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
HLA-DQA1P01909 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC13.86□□□□□ -0.19
HLA-DQA1P01909 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
HLA-DQA1P01909 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HLA-DQA1P01909 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
HLA-DQA1P01909 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HLA-DQA1P01909 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HLA-DQA1P01909 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
HLA-DQA1P01909 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HLA-DQA1P01909 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HLA-DQA1P01909 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
HLA-DQA1P01909 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC13.86□□□□□ -0.19
HLA-DQA1P01909 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC13.86□□□□□ -0.19
HLA-DQA1P01909 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
HLA-DQA1P01909 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HLA-DQA1P01909 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HLA-DQA1P01909 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC13.85□□□□□ -0.19
HLA-DQA1P01909 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HLA-DQA1P01909 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HLA-DQA1P01909 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HLA-DQA1P01909 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
HLA-DQA1P01909 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC13.85□□□□□ -0.19
HLA-DQA1P01909 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
HLA-DQA1P01909 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HLA-DQA1P01909 AC008894.3-201ENST00000624324 3103 ntBASIC13.85□□□□□ -0.19
HLA-DQA1P01909 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC13.85□□□□□ -0.19
HLA-DQA1P01909 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC13.85□□□□□ -0.19
HLA-DQA1P01909 TFP1-202ENST00000475455 1573 ntBASIC13.85□□□□□ -0.19
HLA-DQA1P01909 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
HLA-DQA1P01909 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC13.85□□□□□ -0.19
HLA-DQA1P01909 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HLA-DQA1P01909 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
HLA-DQA1P01909 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC13.85□□□□□ -0.19
HLA-DQA1P01909 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC13.85□□□□□ -0.19
HLA-DQA1P01909 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC13.85□□□□□ -0.19
HLA-DQA1P01909 NME1-207ENST00000480143 964 ntTSL 2 BASIC13.85□□□□□ -0.19
HLA-DQA1P01909 AL162430.1-201ENST00000480705 870 ntBASIC13.85□□□□□ -0.19
HLA-DQA1P01909 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC13.85□□□□□ -0.19
HLA-DQA1P01909 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
HLA-DQA1P01909 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC13.85□□□□□ -0.19
HLA-DQA1P01909 KRT18P61-201ENST00000585825 1298 ntBASIC13.85□□□□□ -0.19
HLA-DQA1P01909 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC13.85□□□□□ -0.19
HLA-DQA1P01909 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HLA-DQA1P01909 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HLA-DQA1P01909 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
HLA-DQA1P01909 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC13.85□□□□□ -0.19
HLA-DQA1P01909 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HLA-DQA1P01909 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HLA-DQA1P01909 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
HLA-DQA1P01909 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HLA-DQA1P01909 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HLA-DQA1P01909 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC13.85□□□□□ -0.19
HLA-DQA1P01909 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
HLA-DQA1P01909 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC13.85□□□□□ -0.19
HLA-DQA1P01909 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HLA-DQA1P01909 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HLA-DQA1P01909 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HLA-DQA1P01909 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HLA-DQA1P01909 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HLA-DQA1P01909 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms