Protein–RNA interactions for Protein: O75309

CDH16, Cadherin-16, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16O75309 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDH16O75309 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDH16O75309 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CDH16O75309 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CDH16O75309 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDH16O75309 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CDH16O75309 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CDH16O75309 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDH16O75309 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.62■□□□□ 0.57
CDH16O75309 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDH16O75309 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDH16O75309 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDH16O75309 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDH16O75309 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDH16O75309 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDH16O75309 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CDH16O75309 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
CDH16O75309 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.62■□□□□ 0.57
CDH16O75309 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.62■□□□□ 0.57
CDH16O75309 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.62■□□□□ 0.57
CDH16O75309 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDH16O75309 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC18.62■□□□□ 0.57
CDH16O75309 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDH16O75309 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CDH16O75309 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDH16O75309 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
CDH16O75309 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CDH16O75309 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.62■□□□□ 0.57
CDH16O75309 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDH16O75309 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDH16O75309 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDH16O75309 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.62■□□□□ 0.57
CDH16O75309 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CDH16O75309 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CDH16O75309 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDH16O75309 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.62■□□□□ 0.57
CDH16O75309 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDH16O75309 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDH16O75309 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
CDH16O75309 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDH16O75309 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDH16O75309 AC108860.2-201ENST00000562760 2183 ntBASIC18.61■□□□□ 0.57
CDH16O75309 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC18.61■□□□□ 0.57
CDH16O75309 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDH16O75309 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.61■□□□□ 0.57
CDH16O75309 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.61■□□□□ 0.57
CDH16O75309 GMCL1P1-201ENST00000463439 1581 ntBASIC18.61■□□□□ 0.57
CDH16O75309 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDH16O75309 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.61■□□□□ 0.57
CDH16O75309 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDH16O75309 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CDH16O75309 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDH16O75309 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDH16O75309 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC18.61■□□□□ 0.57
CDH16O75309 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC18.61■□□□□ 0.57
CDH16O75309 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CDH16O75309 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CDH16O75309 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CDH16O75309 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.61■□□□□ 0.57
CDH16O75309 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDH16O75309 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.61■□□□□ 0.57
CDH16O75309 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDH16O75309 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.61■□□□□ 0.57
CDH16O75309 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDH16O75309 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.61■□□□□ 0.57
CDH16O75309 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.61■□□□□ 0.57
CDH16O75309 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CDH16O75309 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.6■□□□□ 0.57
CDH16O75309 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CDH16O75309 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.6■□□□□ 0.57
CDH16O75309 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.6■□□□□ 0.57
CDH16O75309 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC18.6■□□□□ 0.57
CDH16O75309 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
CDH16O75309 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.6■□□□□ 0.57
CDH16O75309 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CDH16O75309 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDH16O75309 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.6■□□□□ 0.57
CDH16O75309 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CDH16O75309 KRT18P6-201ENST00000555540 1265 ntBASIC18.6■□□□□ 0.57
CDH16O75309 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CDH16O75309 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDH16O75309 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CDH16O75309 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.6■□□□□ 0.57
CDH16O75309 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDH16O75309 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CDH16O75309 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDH16O75309 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.6■□□□□ 0.57
CDH16O75309 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.6■□□□□ 0.57
CDH16O75309 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.6■□□□□ 0.57
CDH16O75309 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CDH16O75309 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDH16O75309 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC18.6■□□□□ 0.57
CDH16O75309 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.6■□□□□ 0.57
CDH16O75309 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC18.59■□□□□ 0.57
CDH16O75309 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDH16O75309 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDH16O75309 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDH16O75309 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDH16O75309 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.59■□□□□ 0.57
CDH16O75309 PCDHA12-202ENST00000613593 2588 ntBASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms