Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
RNF13O43567 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF13O43567 AL357033.4-201ENST00000617703 1807 ntBASIC16.8■□□□□ 0.28
RNF13O43567 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF13O43567 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF13O43567 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF13O43567 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF13O43567 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC16.8■□□□□ 0.28
RNF13O43567 FDX2-206ENST00000492239 773 ntTSL 2 BASIC16.8■□□□□ 0.28
RNF13O43567 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC16.8■□□□□ 0.28
RNF13O43567 AC126763.1-201ENST00000552015 2118 ntBASIC16.8■□□□□ 0.28
RNF13O43567 AP003071.4-201ENST00000562276 1284 ntBASIC16.8■□□□□ 0.28
RNF13O43567 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC16.8■□□□□ 0.28
RNF13O43567 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC16.8■□□□□ 0.28
RNF13O43567 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.8■□□□□ 0.28
RNF13O43567 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF13O43567 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RNF13O43567 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
RNF13O43567 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
RNF13O43567 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC16.8■□□□□ 0.28
RNF13O43567 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF13O43567 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF13O43567 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF13O43567 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
RNF13O43567 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC16.79■□□□□ 0.28
RNF13O43567 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF13O43567 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
RNF13O43567 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF13O43567 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC16.79■□□□□ 0.28
RNF13O43567 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF13O43567 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF13O43567 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF13O43567 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF13O43567 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RNF13O43567 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF13O43567 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RNF13O43567 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC16.79■□□□□ 0.28
RNF13O43567 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF13O43567 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC16.79■□□□□ 0.28
RNF13O43567 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC16.79■□□□□ 0.28
RNF13O43567 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RNF13O43567 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC16.79■□□□□ 0.28
RNF13O43567 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC16.79■□□□□ 0.28
RNF13O43567 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RNF13O43567 MYC-208ENST00000641036 567 ntBASIC16.79■□□□□ 0.28
RNF13O43567 AL162741.1-201ENST00000565563 1558 ntBASIC16.79■□□□□ 0.28
RNF13O43567 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF13O43567 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RNF13O43567 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF13O43567 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
RNF13O43567 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC16.79■□□□□ 0.28
RNF13O43567 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC16.79■□□□□ 0.28
RNF13O43567 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RNF13O43567 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RNF13O43567 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RNF13O43567 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RNF13O43567 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RNF13O43567 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
RNF13O43567 AL499627.1-201ENST00000569373 2188 ntBASIC16.78■□□□□ 0.28
RNF13O43567 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RNF13O43567 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RNF13O43567 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
RNF13O43567 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RNF13O43567 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RNF13O43567 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
RNF13O43567 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.78■□□□□ 0.28
RNF13O43567 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC16.78■□□□□ 0.28
RNF13O43567 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RNF13O43567 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
RNF13O43567 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RNF13O43567 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RNF13O43567 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RNF13O43567 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
RNF13O43567 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC16.78■□□□□ 0.28
RNF13O43567 MIR4785-201ENST00000585005 73 ntBASIC16.78■□□□□ 0.28
RNF13O43567 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RNF13O43567 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC16.78■□□□□ 0.28
RNF13O43567 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC16.78■□□□□ 0.28
RNF13O43567 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RNF13O43567 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RNF13O43567 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RNF13O43567 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RNF13O43567 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RNF13O43567 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
RNF13O43567 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC16.78■□□□□ 0.28
RNF13O43567 TBC1D3P2-202ENST00000577902 1649 ntBASIC16.78■□□□□ 0.28
RNF13O43567 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RNF13O43567 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RNF13O43567 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RNF13O43567 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
RNF13O43567 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.77■□□□□ 0.28
RNF13O43567 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC16.77■□□□□ 0.28
RNF13O43567 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RNF13O43567 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RNF13O43567 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.28
RNF13O43567 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC16.77■□□□□ 0.28
RNF13O43567 UNC93B2-201ENST00000285383 730 ntBASIC16.77■□□□□ 0.28
RNF13O43567 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RNF13O43567 ENSA-205ENST00000361532 792 ntTSL 2 BASIC16.77■□□□□ 0.28
RNF13O43567 BUB3-202ENST00000368859 667 ntTSL 3 BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms