Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC16.79■□□□□ 0.28
NPIPA2E9PIF3 AL157888.1-201ENST00000631930 593 ntBASIC16.79■□□□□ 0.28
NPIPA2E9PIF3 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
NPIPA2E9PIF3 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NPIPA2E9PIF3 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
NPIPA2E9PIF3 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
NPIPA2E9PIF3 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
NPIPA2E9PIF3 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC16.79■□□□□ 0.28
NPIPA2E9PIF3 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
NPIPA2E9PIF3 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NPIPA2E9PIF3 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
NPIPA2E9PIF3 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NPIPA2E9PIF3 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NPIPA2E9PIF3 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
NPIPA2E9PIF3 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
NPIPA2E9PIF3 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NPIPA2E9PIF3 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NPIPA2E9PIF3 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NPIPA2E9PIF3 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC16.78■□□□□ 0.28
NPIPA2E9PIF3 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
NPIPA2E9PIF3 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.78■□□□□ 0.28
NPIPA2E9PIF3 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC16.78■□□□□ 0.28
NPIPA2E9PIF3 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
NPIPA2E9PIF3 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NPIPA2E9PIF3 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
NPIPA2E9PIF3 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC16.78■□□□□ 0.28
NPIPA2E9PIF3 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
NPIPA2E9PIF3 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC16.78■□□□□ 0.28
NPIPA2E9PIF3 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
NPIPA2E9PIF3 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC16.78■□□□□ 0.28
NPIPA2E9PIF3 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC16.78■□□□□ 0.28
NPIPA2E9PIF3 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
NPIPA2E9PIF3 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
NPIPA2E9PIF3 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC16.77■□□□□ 0.28
NPIPA2E9PIF3 TNXA-203ENST00000507684 2038 ntBASIC16.77■□□□□ 0.28
NPIPA2E9PIF3 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NPIPA2E9PIF3 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NPIPA2E9PIF3 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
NPIPA2E9PIF3 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
NPIPA2E9PIF3 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.77■□□□□ 0.28
NPIPA2E9PIF3 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
NPIPA2E9PIF3 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
NPIPA2E9PIF3 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NPIPA2E9PIF3 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC16.77■□□□□ 0.28
NPIPA2E9PIF3 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
NPIPA2E9PIF3 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NPIPA2E9PIF3 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC16.77■□□□□ 0.28
NPIPA2E9PIF3 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC16.77■□□□□ 0.28
NPIPA2E9PIF3 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
NPIPA2E9PIF3 KRT126P-201ENST00000549467 1181 ntBASIC16.77■□□□□ 0.28
NPIPA2E9PIF3 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC16.77■□□□□ 0.28
NPIPA2E9PIF3 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC16.77■□□□□ 0.28
NPIPA2E9PIF3 BCL10-202ENST00000620248 774 ntTSL 5 BASIC16.77■□□□□ 0.28
NPIPA2E9PIF3 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NPIPA2E9PIF3 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
NPIPA2E9PIF3 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NPIPA2E9PIF3 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NPIPA2E9PIF3 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC16.77■□□□□ 0.28
NPIPA2E9PIF3 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
NPIPA2E9PIF3 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
NPIPA2E9PIF3 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
NPIPA2E9PIF3 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
NPIPA2E9PIF3 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC16.77■□□□□ 0.27
NPIPA2E9PIF3 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
NPIPA2E9PIF3 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
NPIPA2E9PIF3 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
NPIPA2E9PIF3 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
NPIPA2E9PIF3 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
NPIPA2E9PIF3 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
NPIPA2E9PIF3 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC16.76■□□□□ 0.27
NPIPA2E9PIF3 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NPIPA2E9PIF3 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NPIPA2E9PIF3 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NPIPA2E9PIF3 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
NPIPA2E9PIF3 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
NPIPA2E9PIF3 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
NPIPA2E9PIF3 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NPIPA2E9PIF3 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NPIPA2E9PIF3 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NPIPA2E9PIF3 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NPIPA2E9PIF3 KRT8P32-201ENST00000512863 1461 ntBASIC16.76■□□□□ 0.27
NPIPA2E9PIF3 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NPIPA2E9PIF3 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NPIPA2E9PIF3 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
NPIPA2E9PIF3 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
NPIPA2E9PIF3 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC16.76■□□□□ 0.27
NPIPA2E9PIF3 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NPIPA2E9PIF3 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC16.76■□□□□ 0.27
NPIPA2E9PIF3 CNP-204ENST00000472031 1019 ntTSL 2 BASIC16.76■□□□□ 0.27
NPIPA2E9PIF3 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC16.76■□□□□ 0.27
NPIPA2E9PIF3 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC16.76■□□□□ 0.27
NPIPA2E9PIF3 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NPIPA2E9PIF3 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC16.76■□□□□ 0.27
NPIPA2E9PIF3 MIR3917-201ENST00000580971 93 ntBASIC16.76■□□□□ 0.27
NPIPA2E9PIF3 AC079602.3-201ENST00000623931 403 ntBASIC16.76■□□□□ 0.27
NPIPA2E9PIF3 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NPIPA2E9PIF3 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC16.76■□□□□ 0.27
NPIPA2E9PIF3 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC16.76■□□□□ 0.27
NPIPA2E9PIF3 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
NPIPA2E9PIF3 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms