Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
HFM1A2PYH4 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC27.14■■□□□ 1.94
HFM1A2PYH4 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
HFM1A2PYH4 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC27.14■■□□□ 1.94
HFM1A2PYH4 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC27.14■■□□□ 1.93
HFM1A2PYH4 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
HFM1A2PYH4 LINC00265-3P-201ENST00000447588 903 ntBASIC27.14■■□□□ 1.93
HFM1A2PYH4 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC27.14■■□□□ 1.93
HFM1A2PYH4 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC27.14■■□□□ 1.93
HFM1A2PYH4 AC005336.2-201ENST00000593183 939 ntBASIC27.14■■□□□ 1.93
HFM1A2PYH4 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC27.14■■□□□ 1.93
HFM1A2PYH4 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
HFM1A2PYH4 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
HFM1A2PYH4 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC27.14■■□□□ 1.93
HFM1A2PYH4 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
HFM1A2PYH4 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
HFM1A2PYH4 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC27.13■■□□□ 1.93
HFM1A2PYH4 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
HFM1A2PYH4 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC27.13■■□□□ 1.93
HFM1A2PYH4 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
HFM1A2PYH4 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
HFM1A2PYH4 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
HFM1A2PYH4 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
HFM1A2PYH4 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
HFM1A2PYH4 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC27.13■■□□□ 1.93
HFM1A2PYH4 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC27.13■■□□□ 1.93
HFM1A2PYH4 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC27.13■■□□□ 1.93
HFM1A2PYH4 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC27.13■■□□□ 1.93
HFM1A2PYH4 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC27.12■■□□□ 1.93
HFM1A2PYH4 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
HFM1A2PYH4 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
HFM1A2PYH4 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
HFM1A2PYH4 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
HFM1A2PYH4 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
HFM1A2PYH4 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
HFM1A2PYH4 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC27.12■■□□□ 1.93
HFM1A2PYH4 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC27.12■■□□□ 1.93
HFM1A2PYH4 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC27.12■■□□□ 1.93
HFM1A2PYH4 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC27.12■■□□□ 1.93
HFM1A2PYH4 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
HFM1A2PYH4 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
HFM1A2PYH4 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
HFM1A2PYH4 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC27.12■■□□□ 1.93
HFM1A2PYH4 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
HFM1A2PYH4 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
HFM1A2PYH4 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
HFM1A2PYH4 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
HFM1A2PYH4 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
HFM1A2PYH4 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
HFM1A2PYH4 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
HFM1A2PYH4 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC27.11■■□□□ 1.93
HFM1A2PYH4 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC27.11■■□□□ 1.93
HFM1A2PYH4 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC27.11■■□□□ 1.93
HFM1A2PYH4 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
HFM1A2PYH4 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
HFM1A2PYH4 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC27.11■■□□□ 1.93
HFM1A2PYH4 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC27.11■■□□□ 1.93
HFM1A2PYH4 IL11-204ENST00000590625 1028 ntTSL 2 BASIC27.11■■□□□ 1.93
HFM1A2PYH4 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC27.11■■□□□ 1.93
HFM1A2PYH4 AC009154.2-201ENST00000621177 724 ntBASIC27.11■■□□□ 1.93
HFM1A2PYH4 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
HFM1A2PYH4 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC27.11■■□□□ 1.93
HFM1A2PYH4 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC27.11■■□□□ 1.93
HFM1A2PYH4 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
HFM1A2PYH4 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC27.11■■□□□ 1.93
HFM1A2PYH4 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
HFM1A2PYH4 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
HFM1A2PYH4 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC27.1■■□□□ 1.93
HFM1A2PYH4 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC27.1■■□□□ 1.93
HFM1A2PYH4 PHGDH-209ENST00000641074 1780 ntBASIC27.1■■□□□ 1.93
HFM1A2PYH4 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC27.1■■□□□ 1.93
HFM1A2PYH4 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC27.1■■□□□ 1.93
HFM1A2PYH4 IGHV3-47-201ENST00000425060 335 ntBASIC27.1■■□□□ 1.93
HFM1A2PYH4 GUSBP12-201ENST00000513727 720 ntBASIC27.1■■□□□ 1.93
HFM1A2PYH4 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC27.1■■□□□ 1.93
HFM1A2PYH4 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC27.1■■□□□ 1.93
HFM1A2PYH4 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC27.1■■□□□ 1.93
HFM1A2PYH4 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
HFM1A2PYH4 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC27.1■■□□□ 1.93
HFM1A2PYH4 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
HFM1A2PYH4 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
HFM1A2PYH4 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC27.1■■□□□ 1.93
HFM1A2PYH4 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC27.1■■□□□ 1.93
HFM1A2PYH4 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC27.1■■□□□ 1.93
HFM1A2PYH4 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC27.1■■□□□ 1.93
HFM1A2PYH4 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
HFM1A2PYH4 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
HFM1A2PYH4 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC27.1■■□□□ 1.93
HFM1A2PYH4 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC27.1■■□□□ 1.93
HFM1A2PYH4 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
HFM1A2PYH4 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
HFM1A2PYH4 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC27.09■■□□□ 1.93
HFM1A2PYH4 LINC00602-201ENST00000629776 2065 ntBASIC27.09■■□□□ 1.93
HFM1A2PYH4 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC27.09■■□□□ 1.93
HFM1A2PYH4 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC27.09■■□□□ 1.93
HFM1A2PYH4 KRT18P65-201ENST00000439811 1286 ntBASIC27.09■■□□□ 1.93
HFM1A2PYH4 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC27.09■■□□□ 1.93
HFM1A2PYH4 PRR29-207ENST00000580752 458 ntTSL 3 BASIC27.09■■□□□ 1.93
HFM1A2PYH4 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
HFM1A2PYH4 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC27.09■■□□□ 1.93
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms