Protein–RNA interactions for Protein: A0A1B0GVL6

TMEM238L, HCG1800530, isoform CRA_b, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM238LA0A1B0GVL6 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TMEM238LA0A1B0GVL6 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TMEM238LA0A1B0GVL6 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TMEM238LA0A1B0GVL6 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TMEM238LA0A1B0GVL6 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TMEM238LA0A1B0GVL6 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
TMEM238LA0A1B0GVL6 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TMEM238LA0A1B0GVL6 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TMEM238LA0A1B0GVL6 SLC3A1-205ENST00000409387 2334 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TMEM238LA0A1B0GVL6 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
TMEM238LA0A1B0GVL6 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TMEM238LA0A1B0GVL6 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TMEM238LA0A1B0GVL6 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC12.92□□□□□ -0.34
TMEM238LA0A1B0GVL6 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
TMEM238LA0A1B0GVL6 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
TMEM238LA0A1B0GVL6 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
TMEM238LA0A1B0GVL6 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC12.92□□□□□ -0.34
TMEM238LA0A1B0GVL6 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
TMEM238LA0A1B0GVL6 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TMEM238LA0A1B0GVL6 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TMEM238LA0A1B0GVL6 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TMEM238LA0A1B0GVL6 STK24-201ENST00000376547 2492 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
TMEM238LA0A1B0GVL6 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TMEM238LA0A1B0GVL6 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC12.91□□□□□ -0.34
TMEM238LA0A1B0GVL6 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC12.91□□□□□ -0.34
TMEM238LA0A1B0GVL6 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TMEM238LA0A1B0GVL6 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TMEM238LA0A1B0GVL6 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC12.91□□□□□ -0.34
TMEM238LA0A1B0GVL6 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
TMEM238LA0A1B0GVL6 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TMEM238LA0A1B0GVL6 TSPY26P-202ENST00000565928 3884 ntBASIC12.91□□□□□ -0.34
TMEM238LA0A1B0GVL6 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
TMEM238LA0A1B0GVL6 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC12.91□□□□□ -0.34
TMEM238LA0A1B0GVL6 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC12.91□□□□□ -0.34
TMEM238LA0A1B0GVL6 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC12.91□□□□□ -0.34
TMEM238LA0A1B0GVL6 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TMEM238LA0A1B0GVL6 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC12.91□□□□□ -0.34
TMEM238LA0A1B0GVL6 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TMEM238LA0A1B0GVL6 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TMEM238LA0A1B0GVL6 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
TMEM238LA0A1B0GVL6 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC12.91□□□□□ -0.34
TMEM238LA0A1B0GVL6 TFPT-201ENST00000391757 774 ntTSL 5 BASIC12.91□□□□□ -0.34
TMEM238LA0A1B0GVL6 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
TMEM238LA0A1B0GVL6 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC12.91□□□□□ -0.34
TMEM238LA0A1B0GVL6 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
TMEM238LA0A1B0GVL6 AC006455.2-201ENST00000429931 906 ntBASIC12.91□□□□□ -0.34
TMEM238LA0A1B0GVL6 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC12.91□□□□□ -0.34
TMEM238LA0A1B0GVL6 AC116337.3-201ENST00000505200 846 ntTSL 3 BASIC12.91□□□□□ -0.34
TMEM238LA0A1B0GVL6 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC12.91□□□□□ -0.34
TMEM238LA0A1B0GVL6 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC12.91□□□□□ -0.34
TMEM238LA0A1B0GVL6 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
TMEM238LA0A1B0GVL6 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
TMEM238LA0A1B0GVL6 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TMEM238LA0A1B0GVL6 GSN-206ENST00000394353 2311 ntTSL 2 BASIC12.91□□□□□ -0.34
TMEM238LA0A1B0GVL6 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
TMEM238LA0A1B0GVL6 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
TMEM238LA0A1B0GVL6 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
TMEM238LA0A1B0GVL6 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TMEM238LA0A1B0GVL6 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TMEM238LA0A1B0GVL6 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TMEM238LA0A1B0GVL6 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC12.91□□□□□ -0.34
TMEM238LA0A1B0GVL6 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TMEM238LA0A1B0GVL6 CALD1-205ENST00000422748 2665 ntTSL 2 BASIC12.91□□□□□ -0.34
TMEM238LA0A1B0GVL6 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
TMEM238LA0A1B0GVL6 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TMEM238LA0A1B0GVL6 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC12.91□□□□□ -0.34
TMEM238LA0A1B0GVL6 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC12.91□□□□□ -0.34
TMEM238LA0A1B0GVL6 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC12.91□□□□□ -0.34
TMEM238LA0A1B0GVL6 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TMEM238LA0A1B0GVL6 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TMEM238LA0A1B0GVL6 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
TMEM238LA0A1B0GVL6 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC12.91□□□□□ -0.34
TMEM238LA0A1B0GVL6 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TMEM238LA0A1B0GVL6 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TMEM238LA0A1B0GVL6 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
TMEM238LA0A1B0GVL6 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
TMEM238LA0A1B0GVL6 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
TMEM238LA0A1B0GVL6 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TMEM238LA0A1B0GVL6 GSN-203ENST00000373808 2664 ntTSL 2 BASIC12.9□□□□□ -0.34
TMEM238LA0A1B0GVL6 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TMEM238LA0A1B0GVL6 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC12.9□□□□□ -0.34
TMEM238LA0A1B0GVL6 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC12.9□□□□□ -0.34
TMEM238LA0A1B0GVL6 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
TMEM238LA0A1B0GVL6 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC12.9□□□□□ -0.34
TMEM238LA0A1B0GVL6 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TMEM238LA0A1B0GVL6 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TMEM238LA0A1B0GVL6 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
TMEM238LA0A1B0GVL6 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TMEM238LA0A1B0GVL6 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
TMEM238LA0A1B0GVL6 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TMEM238LA0A1B0GVL6 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
TMEM238LA0A1B0GVL6 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TMEM238LA0A1B0GVL6 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC12.9□□□□□ -0.34
TMEM238LA0A1B0GVL6 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TMEM238LA0A1B0GVL6 AC010525.1-201ENST00000585559 441 ntBASIC12.9□□□□□ -0.34
TMEM238LA0A1B0GVL6 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC12.9□□□□□ -0.34
TMEM238LA0A1B0GVL6 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TMEM238LA0A1B0GVL6 FANCC-210ENST00000490972 2709 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TMEM238LA0A1B0GVL6 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TMEM238LA0A1B0GVL6 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms