Protein–RNA interactions for Protein: S4R434

TMEM56-RWDD3, TMEM56-RWDD3 readthrough, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-RWDD3S4R434 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TMEM56-RWDD3S4R434 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TMEM56-RWDD3S4R434 AP004609.3-201ENST00000610705 1884 ntBASIC20.35■□□□□ 0.85
TMEM56-RWDD3S4R434 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TMEM56-RWDD3S4R434 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
TMEM56-RWDD3S4R434 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC20.35■□□□□ 0.85
TMEM56-RWDD3S4R434 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TMEM56-RWDD3S4R434 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
TMEM56-RWDD3S4R434 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
TMEM56-RWDD3S4R434 MIR762-201ENST00000390236 83 ntBASIC20.34■□□□□ 0.85
TMEM56-RWDD3S4R434 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC20.34■□□□□ 0.85
TMEM56-RWDD3S4R434 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC20.34■□□□□ 0.85
TMEM56-RWDD3S4R434 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
TMEM56-RWDD3S4R434 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC20.33■□□□□ 0.85
TMEM56-RWDD3S4R434 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TMEM56-RWDD3S4R434 RPS2-209ENST00000529806 993 ntTSL 3 BASIC20.33■□□□□ 0.85
TMEM56-RWDD3S4R434 AC136428.2-201ENST00000563187 214 ntBASIC20.33■□□□□ 0.85
TMEM56-RWDD3S4R434 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC20.33■□□□□ 0.85
TMEM56-RWDD3S4R434 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC20.33■□□□□ 0.84
TMEM56-RWDD3S4R434 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC20.33■□□□□ 0.84
TMEM56-RWDD3S4R434 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC20.33■□□□□ 0.84
TMEM56-RWDD3S4R434 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TMEM56-RWDD3S4R434 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TMEM56-RWDD3S4R434 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TMEM56-RWDD3S4R434 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TMEM56-RWDD3S4R434 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TMEM56-RWDD3S4R434 LINC00273-201ENST00000539813 1452 ntBASIC20.31■□□□□ 0.84
TMEM56-RWDD3S4R434 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TMEM56-RWDD3S4R434 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TMEM56-RWDD3S4R434 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TMEM56-RWDD3S4R434 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TMEM56-RWDD3S4R434 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
TMEM56-RWDD3S4R434 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
TMEM56-RWDD3S4R434 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TMEM56-RWDD3S4R434 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
TMEM56-RWDD3S4R434 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TMEM56-RWDD3S4R434 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
TMEM56-RWDD3S4R434 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.31■□□□□ 0.84
TMEM56-RWDD3S4R434 SNAI3-AS1-204ENST00000567997 2048 ntBASIC20.31■□□□□ 0.84
TMEM56-RWDD3S4R434 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC20.3■□□□□ 0.84
TMEM56-RWDD3S4R434 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TMEM56-RWDD3S4R434 EI24-212ENST00000615917 1407 ntTSL 2 BASIC20.3■□□□□ 0.84
TMEM56-RWDD3S4R434 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
TMEM56-RWDD3S4R434 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
TMEM56-RWDD3S4R434 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC20.3■□□□□ 0.84
TMEM56-RWDD3S4R434 CHML-205ENST00000638160 705 ntTSL 3 BASIC20.3■□□□□ 0.84
TMEM56-RWDD3S4R434 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TMEM56-RWDD3S4R434 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TMEM56-RWDD3S4R434 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
TMEM56-RWDD3S4R434 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TMEM56-RWDD3S4R434 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
TMEM56-RWDD3S4R434 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC20.29■□□□□ 0.84
TMEM56-RWDD3S4R434 AC093323.1-202ENST00000635031 2045 ntBASIC20.29■□□□□ 0.84
TMEM56-RWDD3S4R434 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TMEM56-RWDD3S4R434 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TMEM56-RWDD3S4R434 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TMEM56-RWDD3S4R434 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TMEM56-RWDD3S4R434 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TMEM56-RWDD3S4R434 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC20.28■□□□□ 0.84
TMEM56-RWDD3S4R434 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TMEM56-RWDD3S4R434 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TMEM56-RWDD3S4R434 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TMEM56-RWDD3S4R434 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
TMEM56-RWDD3S4R434 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC20.27■□□□□ 0.84
TMEM56-RWDD3S4R434 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC20.27■□□□□ 0.84
TMEM56-RWDD3S4R434 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TMEM56-RWDD3S4R434 AC097358.2-201ENST00000607541 1159 ntBASIC20.27■□□□□ 0.84
TMEM56-RWDD3S4R434 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
TMEM56-RWDD3S4R434 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
TMEM56-RWDD3S4R434 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
TMEM56-RWDD3S4R434 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TMEM56-RWDD3S4R434 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TMEM56-RWDD3S4R434 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TMEM56-RWDD3S4R434 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
TMEM56-RWDD3S4R434 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TMEM56-RWDD3S4R434 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TMEM56-RWDD3S4R434 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC20.24■□□□□ 0.83
TMEM56-RWDD3S4R434 AC108673.1-201ENST00000510422 1159 ntBASIC20.24■□□□□ 0.83
TMEM56-RWDD3S4R434 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
TMEM56-RWDD3S4R434 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TMEM56-RWDD3S4R434 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TMEM56-RWDD3S4R434 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.23■□□□□ 0.83
TMEM56-RWDD3S4R434 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TMEM56-RWDD3S4R434 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC20.23■□□□□ 0.83
TMEM56-RWDD3S4R434 AC142472.1-201ENST00000612013 1741 ntBASIC20.23■□□□□ 0.83
TMEM56-RWDD3S4R434 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TMEM56-RWDD3S4R434 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TMEM56-RWDD3S4R434 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TMEM56-RWDD3S4R434 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
TMEM56-RWDD3S4R434 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TMEM56-RWDD3S4R434 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TMEM56-RWDD3S4R434 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
TMEM56-RWDD3S4R434 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC20.21■□□□□ 0.83
TMEM56-RWDD3S4R434 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC20.21■□□□□ 0.83
TMEM56-RWDD3S4R434 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TMEM56-RWDD3S4R434 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
TMEM56-RWDD3S4R434 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TMEM56-RWDD3S4R434 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TMEM56-RWDD3S4R434 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TMEM56-RWDD3S4R434 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms