Protein–RNA interactions for Protein: Q9Y5H1

PCDHGA2, Protocadherin gamma-A2, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA2Q9Y5H1 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC25.4■■□□□ 1.66
PCDHGA2Q9Y5H1 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC25.39■■□□□ 1.66
PCDHGA2Q9Y5H1 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC25.39■■□□□ 1.66
PCDHGA2Q9Y5H1 RP9P-202ENST00000450133 1212 ntBASIC25.39■■□□□ 1.66
PCDHGA2Q9Y5H1 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC25.38■■□□□ 1.65
PCDHGA2Q9Y5H1 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC25.38■■□□□ 1.65
PCDHGA2Q9Y5H1 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC25.38■■□□□ 1.65
PCDHGA2Q9Y5H1 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC25.37■■□□□ 1.65
PCDHGA2Q9Y5H1 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
PCDHGA2Q9Y5H1 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
PCDHGA2Q9Y5H1 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC25.37■■□□□ 1.65
PCDHGA2Q9Y5H1 HES6-204ENST00000409182 863 ntTSL 2 BASIC25.37■■□□□ 1.65
PCDHGA2Q9Y5H1 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
PCDHGA2Q9Y5H1 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC25.37■■□□□ 1.65
PCDHGA2Q9Y5H1 SMPD5-203ENST00000639008 1464 ntBASIC25.36■■□□□ 1.65
PCDHGA2Q9Y5H1 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
PCDHGA2Q9Y5H1 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
PCDHGA2Q9Y5H1 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
PCDHGA2Q9Y5H1 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
PCDHGA2Q9Y5H1 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
PCDHGA2Q9Y5H1 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
PCDHGA2Q9Y5H1 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
PCDHGA2Q9Y5H1 AC010980.1-201ENST00000587192 1142 ntBASIC25.35■■□□□ 1.65
PCDHGA2Q9Y5H1 AC026202.3-201ENST00000600805 1127 ntBASIC25.35■■□□□ 1.65
PCDHGA2Q9Y5H1 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
PCDHGA2Q9Y5H1 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC25.35■■□□□ 1.65
PCDHGA2Q9Y5H1 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
PCDHGA2Q9Y5H1 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC25.35■■□□□ 1.65
PCDHGA2Q9Y5H1 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC25.34■■□□□ 1.65
PCDHGA2Q9Y5H1 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC25.34■■□□□ 1.65
PCDHGA2Q9Y5H1 DUX4L9-201ENST00000449051 1259 ntBASIC25.34■■□□□ 1.65
PCDHGA2Q9Y5H1 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC25.34■■□□□ 1.65
PCDHGA2Q9Y5H1 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
PCDHGA2Q9Y5H1 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC25.34■■□□□ 1.65
PCDHGA2Q9Y5H1 THA1P-201ENST00000590384 1145 ntBASIC25.34■■□□□ 1.65
PCDHGA2Q9Y5H1 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
PCDHGA2Q9Y5H1 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC25.34■■□□□ 1.65
PCDHGA2Q9Y5H1 KRT8P33-201ENST00000508125 1423 ntBASIC25.33■■□□□ 1.65
PCDHGA2Q9Y5H1 AL135925.1-201ENST00000605920 1701 ntBASIC25.33■■□□□ 1.65
PCDHGA2Q9Y5H1 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
PCDHGA2Q9Y5H1 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.64
PCDHGA2Q9Y5H1 ABCB10P1-201ENST00000614297 2181 ntBASIC25.32■■□□□ 1.64
PCDHGA2Q9Y5H1 YBX1P4-201ENST00000392794 808 ntBASIC25.32■■□□□ 1.64
PCDHGA2Q9Y5H1 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC25.32■■□□□ 1.64
PCDHGA2Q9Y5H1 MEST-211ENST00000437945 1455 ntTSL 5 BASIC25.32■■□□□ 1.64
PCDHGA2Q9Y5H1 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
PCDHGA2Q9Y5H1 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
PCDHGA2Q9Y5H1 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
PCDHGA2Q9Y5H1 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
PCDHGA2Q9Y5H1 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
PCDHGA2Q9Y5H1 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC25.31■■□□□ 1.64
PCDHGA2Q9Y5H1 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC25.31■■□□□ 1.64
PCDHGA2Q9Y5H1 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
PCDHGA2Q9Y5H1 GUSBP5-201ENST00000418136 578 ntBASIC25.29■■□□□ 1.64
PCDHGA2Q9Y5H1 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
PCDHGA2Q9Y5H1 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC25.29■■□□□ 1.64
PCDHGA2Q9Y5H1 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC25.28■■□□□ 1.64
PCDHGA2Q9Y5H1 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
PCDHGA2Q9Y5H1 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC25.28■■□□□ 1.64
PCDHGA2Q9Y5H1 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
PCDHGA2Q9Y5H1 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC25.27■■□□□ 1.64
PCDHGA2Q9Y5H1 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC25.27■■□□□ 1.64
PCDHGA2Q9Y5H1 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
PCDHGA2Q9Y5H1 OR2A1-AS1-204ENST00000470435 602 ntBASIC25.26■■□□□ 1.63
PCDHGA2Q9Y5H1 AC139795.1-202ENST00000500444 432 ntBASIC25.26■■□□□ 1.63
PCDHGA2Q9Y5H1 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC25.26■■□□□ 1.63
PCDHGA2Q9Y5H1 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC25.26■■□□□ 1.63
PCDHGA2Q9Y5H1 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC25.26■■□□□ 1.63
PCDHGA2Q9Y5H1 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
PCDHGA2Q9Y5H1 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
PCDHGA2Q9Y5H1 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
PCDHGA2Q9Y5H1 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC25.24■■□□□ 1.63
PCDHGA2Q9Y5H1 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
PCDHGA2Q9Y5H1 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
PCDHGA2Q9Y5H1 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC25.24■■□□□ 1.63
PCDHGA2Q9Y5H1 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
PCDHGA2Q9Y5H1 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC25.23■■□□□ 1.63
PCDHGA2Q9Y5H1 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
PCDHGA2Q9Y5H1 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC25.23■■□□□ 1.63
PCDHGA2Q9Y5H1 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
PCDHGA2Q9Y5H1 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
PCDHGA2Q9Y5H1 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC25.23■■□□□ 1.63
PCDHGA2Q9Y5H1 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC25.23■■□□□ 1.63
PCDHGA2Q9Y5H1 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
PCDHGA2Q9Y5H1 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC25.22■■□□□ 1.63
PCDHGA2Q9Y5H1 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC25.22■■□□□ 1.63
PCDHGA2Q9Y5H1 BEX3-202ENST00000372634 753 ntTSL 2 BASIC25.22■■□□□ 1.63
PCDHGA2Q9Y5H1 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
PCDHGA2Q9Y5H1 HYI-210ENST00000486909 905 ntTSL 5 BASIC25.22■■□□□ 1.63
PCDHGA2Q9Y5H1 AC103834.1-201ENST00000520383 144 ntBASIC25.22■■□□□ 1.63
PCDHGA2Q9Y5H1 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC25.22■■□□□ 1.63
PCDHGA2Q9Y5H1 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC25.21■■□□□ 1.63
PCDHGA2Q9Y5H1 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
PCDHGA2Q9Y5H1 AC025884.2-201ENST00000553429 711 ntBASIC25.21■■□□□ 1.63
PCDHGA2Q9Y5H1 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC25.21■■□□□ 1.63
PCDHGA2Q9Y5H1 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
PCDHGA2Q9Y5H1 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
PCDHGA2Q9Y5H1 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
PCDHGA2Q9Y5H1 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
PCDHGA2Q9Y5H1 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms