Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC24.24■■□□□ 1.47
RNF11Q9Y3C5 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC24.24■■□□□ 1.47
RNF11Q9Y3C5 PKM-204ENST00000449901 2526 ntTSL 2 BASIC24.24■■□□□ 1.47
RNF11Q9Y3C5 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
RNF11Q9Y3C5 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC24.23■■□□□ 1.47
RNF11Q9Y3C5 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC24.23■■□□□ 1.47
RNF11Q9Y3C5 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC24.23■■□□□ 1.47
RNF11Q9Y3C5 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC24.23■■□□□ 1.47
RNF11Q9Y3C5 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC24.23■■□□□ 1.47
RNF11Q9Y3C5 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC24.23■■□□□ 1.47
RNF11Q9Y3C5 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
RNF11Q9Y3C5 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
RNF11Q9Y3C5 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC24.22■■□□□ 1.47
RNF11Q9Y3C5 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
RNF11Q9Y3C5 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC24.22■■□□□ 1.47
RNF11Q9Y3C5 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
RNF11Q9Y3C5 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
RNF11Q9Y3C5 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
RNF11Q9Y3C5 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC24.2■■□□□ 1.47
RNF11Q9Y3C5 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
RNF11Q9Y3C5 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC24.2■■□□□ 1.46
RNF11Q9Y3C5 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC24.2■■□□□ 1.46
RNF11Q9Y3C5 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
RNF11Q9Y3C5 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
RNF11Q9Y3C5 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC24.19■■□□□ 1.46
RNF11Q9Y3C5 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
RNF11Q9Y3C5 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
RNF11Q9Y3C5 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC24.19■■□□□ 1.46
RNF11Q9Y3C5 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
RNF11Q9Y3C5 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC24.18■■□□□ 1.46
RNF11Q9Y3C5 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC24.18■■□□□ 1.46
RNF11Q9Y3C5 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
RNF11Q9Y3C5 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC24.18■■□□□ 1.46
RNF11Q9Y3C5 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC24.18■■□□□ 1.46
RNF11Q9Y3C5 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC24.18■■□□□ 1.46
RNF11Q9Y3C5 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC24.18■■□□□ 1.46
RNF11Q9Y3C5 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC24.17■■□□□ 1.46
RNF11Q9Y3C5 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
RNF11Q9Y3C5 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
RNF11Q9Y3C5 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC24.17■■□□□ 1.46
RNF11Q9Y3C5 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
RNF11Q9Y3C5 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
RNF11Q9Y3C5 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC24.17■■□□□ 1.46
RNF11Q9Y3C5 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC24.17■■□□□ 1.46
RNF11Q9Y3C5 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC24.16■■□□□ 1.46
RNF11Q9Y3C5 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
RNF11Q9Y3C5 LINC01971-201ENST00000617888 1048 ntBASIC24.16■■□□□ 1.46
RNF11Q9Y3C5 CHML-204ENST00000638121 920 ntTSL 2 BASIC24.16■■□□□ 1.46
RNF11Q9Y3C5 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
RNF11Q9Y3C5 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC24.16■■□□□ 1.46
RNF11Q9Y3C5 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC24.16■■□□□ 1.46
RNF11Q9Y3C5 AL449106.1-201ENST00000608517 1980 ntBASIC24.16■■□□□ 1.46
RNF11Q9Y3C5 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC24.15■■□□□ 1.46
RNF11Q9Y3C5 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
RNF11Q9Y3C5 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC24.15■■□□□ 1.46
RNF11Q9Y3C5 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC24.15■■□□□ 1.46
RNF11Q9Y3C5 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC24.15■■□□□ 1.46
RNF11Q9Y3C5 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
RNF11Q9Y3C5 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC24.15■■□□□ 1.46
RNF11Q9Y3C5 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC24.15■■□□□ 1.46
RNF11Q9Y3C5 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
RNF11Q9Y3C5 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC24.14■■□□□ 1.46
RNF11Q9Y3C5 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC24.14■■□□□ 1.45
RNF11Q9Y3C5 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
RNF11Q9Y3C5 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC24.13■■□□□ 1.45
RNF11Q9Y3C5 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC24.12■■□□□ 1.45
RNF11Q9Y3C5 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
RNF11Q9Y3C5 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC24.11■■□□□ 1.45
RNF11Q9Y3C5 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
RNF11Q9Y3C5 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC24.11■■□□□ 1.45
RNF11Q9Y3C5 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC24.1■■□□□ 1.45
RNF11Q9Y3C5 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC24.1■■□□□ 1.45
RNF11Q9Y3C5 MLEC-202ENST00000412616 841 ntTSL 3 BASIC24.09■■□□□ 1.45
RNF11Q9Y3C5 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC24.09■■□□□ 1.45
RNF11Q9Y3C5 RPS2-210ENST00000530225 765 ntTSL 2 BASIC24.09■■□□□ 1.45
RNF11Q9Y3C5 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC24.09■■□□□ 1.45
RNF11Q9Y3C5 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC24.09■■□□□ 1.45
RNF11Q9Y3C5 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
RNF11Q9Y3C5 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
RNF11Q9Y3C5 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
RNF11Q9Y3C5 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC24.08■■□□□ 1.45
RNF11Q9Y3C5 DUX4L13-201ENST00000554103 1267 ntBASIC24.08■■□□□ 1.45
RNF11Q9Y3C5 DUX4L15-201ENST00000611059 1267 ntBASIC24.08■■□□□ 1.45
RNF11Q9Y3C5 DUX4L23-201ENST00000615195 1269 ntBASIC24.08■■□□□ 1.45
RNF11Q9Y3C5 DUX4L24-201ENST00000617576 1269 ntBASIC24.08■■□□□ 1.45
RNF11Q9Y3C5 DUX4L22-201ENST00000618238 1269 ntBASIC24.08■■□□□ 1.45
RNF11Q9Y3C5 DUX4L20-201ENST00000619712 1269 ntBASIC24.08■■□□□ 1.45
RNF11Q9Y3C5 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC24.08■■□□□ 1.45
RNF11Q9Y3C5 DUX4L21-201ENST00000622058 1269 ntBASIC24.08■■□□□ 1.45
RNF11Q9Y3C5 DUX4L10-201ENST00000622460 1267 ntBASIC24.08■■□□□ 1.45
RNF11Q9Y3C5 DUX4L25-201ENST00000624915 1269 ntBASIC24.08■■□□□ 1.45
RNF11Q9Y3C5 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
RNF11Q9Y3C5 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC24.06■■□□□ 1.44
RNF11Q9Y3C5 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC24.06■■□□□ 1.44
RNF11Q9Y3C5 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
RNF11Q9Y3C5 ZNRF2P2-203ENST00000454624 420 ntBASIC24.06■■□□□ 1.44
RNF11Q9Y3C5 DUX4L11-201ENST00000611504 1267 ntBASIC24.06■■□□□ 1.44
RNF11Q9Y3C5 DUX4L12-201ENST00000614593 1267 ntBASIC24.06■■□□□ 1.44
RNF11Q9Y3C5 DUX4L14-201ENST00000621227 1267 ntBASIC24.06■■□□□ 1.44
RNF11Q9Y3C5 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms