Protein–RNA interactions for Protein: Q9Y221

NIP7, 60S ribosome subunit biogenesis protein NIP7 homolog, humanhuman

Known RBP eCLIP

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7Q9Y221 LRP5-205ENST00000529702 586 ntTSL 315.11■□□□□ 0.015e-11■■□□□ 11.8
NIP7Q9Y221 RPS21-201ENST00000343986 344 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.41e-12■■□□□ 11.8
NIP7Q9Y221 LRP5-204ENST00000529481 551 ntTSL 311.8□□□□□ -0.525e-11■■□□□ 11.8
NIP7Q9Y221 AL049839.2-201ENST00000553947 3067 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.732e-6■■□□□ 11.8
NIP7Q9Y221 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC21.52■■□□□ 1.041e-323■■□□□ 11.8
NIP7Q9Y221 SNHG5-203ENST00000420199 1002 ntTSL 320.36■□□□□ 0.851e-323■■□□□ 11.8
NIP7Q9Y221 SNHG5-215ENST00000623163 851 ntTSL 519.17■□□□□ 0.661e-323■■□□□ 11.8
NIP7Q9Y221 SNHG5-209ENST00000435947 696 ntTSL 218.24■□□□□ 0.511e-323■■□□□ 11.8
NIP7Q9Y221 SNHG5-211ENST00000587692 1029 ntTSL 3 BASIC16.46■□□□□ 0.231e-323■■□□□ 11.8
NIP7Q9Y221 SNHG5-206ENST00000428833 641 ntTSL 216.04■□□□□ 0.161e-323■■□□□ 11.8
NIP7Q9Y221 SNHG5-210ENST00000453754 401 ntTSL 316.04■□□□□ 0.161e-323■■□□□ 11.8
NIP7Q9Y221 SNHG5-207ENST00000431043 998 ntTSL 215.81■□□□□ 0.121e-323■■□□□ 11.8
NIP7Q9Y221 SNHG5-213ENST00000622963 753 ntTSL 5 BASIC15.81■□□□□ 0.121e-323■■□□□ 11.8
NIP7Q9Y221 SNHG5-212ENST00000589187 568 ntTSL 4 BASIC14.15□□□□□ -0.141e-323■■□□□ 11.8
NIP7Q9Y221 SNHG5-202ENST00000414002 430 ntTSL 212.88□□□□□ -0.351e-323■■□□□ 11.8
NIP7Q9Y221 SNHG5-220ENST00000624128 672 ntTSL 211.12□□□□□ -0.631e-323■■□□□ 11.8
NIP7Q9Y221 SNHG5-218ENST00000623901 711 ntTSL 5 BASIC10.46□□□□□ -0.731e-323■■□□□ 11.8
NIP7Q9Y221 SNHG5-217ENST00000623650 886 ntTSL 510.13□□□□□ -0.791e-323■■□□□ 11.8
NIP7Q9Y221 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC8.14□□□□□ -1.111e-323■■□□□ 11.8
NIP7Q9Y221 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC6.8□□□□□ -1.321e-323■■□□□ 11.8
NIP7Q9Y221 SNHG5-216ENST00000623267 374 ntTSL 56.8□□□□□ -1.321e-323■■□□□ 11.8
NIP7Q9Y221 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC4.24□□□□□ -1.731e-323■■□□□ 11.8
NIP7Q9Y221 SNHG5-205ENST00000427501 680 ntTSL 23.82□□□□□ -1.81e-323■■□□□ 11.8
NIP7Q9Y221 SNHG5-208ENST00000433843 388 ntTSL 21.82□□□□□ -2.121e-323■■□□□ 11.8
NIP7Q9Y221 WDR43-202ENST00000407426 3533 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.111e-323■■□□□ 11.8
NIP7Q9Y221 WDR43-201ENST00000296126 787 ntTSL 54.05□□□□□ -1.761e-323■■□□□ 11.8
NIP7Q9Y221 WDR43-204ENST00000440983 541 ntTSL 43.32□□□□□ -1.881e-323■■□□□ 11.8
NIP7Q9Y221 SNORD92-201ENST00000585078 85 ntBASIC0.54□□□□□ -2.321e-323■■□□□ 11.8
NIP7Q9Y221 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC27.47■■□□□ 1.991e-32■■□□□ 11.7
NIP7Q9Y221 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC26.81■■□□□ 1.881e-32■■□□□ 11.7
NIP7Q9Y221 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC26.57■■□□□ 1.841e-32■■□□□ 11.7
NIP7Q9Y221 FN1-215ENST00000461974 571 ntTSL 23.23□□□□□ -1.893e-50■■□□□ 11.7
NIP7Q9Y221 RPS21-202ENST00000370562 1002 ntTSL 2 BASIC16.04■□□□□ 0.162e-12■■□□□ 11.5
NIP7Q9Y221 RPS21-203ENST00000370592 401 ntTSL 215.84■□□□□ 0.132e-12■■□□□ 11.5
NIP7Q9Y221 RPS21-204ENST00000450116 418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.052e-12■■□□□ 11.5
NIP7Q9Y221 AHSG-203ENST00000478441 1269 ntTSL 217.31■□□□□ 0.361e-65■■□□□ 11.5
NIP7Q9Y221 FN1-213ENST00000456923 3720 ntTSL 27.79□□□□□ -1.165e-29■■□□□ 11.5
NIP7Q9Y221 FN1-224ENST00000492816 9171 ntTSL 56.23□□□□□ -1.415e-29■■□□□ 11.5
NIP7Q9Y221 TF-210ENST00000482271 659 ntTSL 424.18■■□□□ 1.463e-42■■□□□ 11.5
NIP7Q9Y221 EPAS1-202ENST00000449347 1067 ntTSL 324.97■■□□□ 1.596e-9■■□□□ 11.4
NIP7Q9Y221 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.376e-9■■□□□ 11.4
NIP7Q9Y221 AC124312.3-201ENST00000567527 1236 ntBASIC14.65□□□□□ -0.066e-9■■□□□ 11.4
NIP7Q9Y221 EPAS1-204ENST00000463191 559 ntTSL 28.09□□□□□ -1.116e-9■■□□□ 11.4
NIP7Q9Y221 SNORD116-20-201ENST00000384529 92 ntBASIC2.2□□□□□ -2.066e-9■■□□□ 11.4
NIP7Q9Y221 APOB-201ENST00000233242 14121 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.984e-13■□□□□ 11.3
NIP7Q9Y221 AMBP-204ENST00000603230 1057 ntTSL 1 (best)19.87■□□□□ 0.778e-12■□□□□ 11.3
NIP7Q9Y221 AMBP-202ENST00000466610 579 ntTSL 313.92□□□□□ -0.188e-12■□□□□ 11.3
NIP7Q9Y221 FN1-201ENST00000323926 8708 ntTSL 1 (best) BASIC14.07□□□□□ -0.163e-24■□□□□ 11.2
NIP7Q9Y221 FN1-202ENST00000336916 8435 ntTSL 1 (best) BASIC13.93□□□□□ -0.183e-24■□□□□ 11.2
NIP7Q9Y221 FN1-206ENST00000359671 8524 ntTSL 5 BASIC13.66□□□□□ -0.223e-24■□□□□ 11.2
NIP7Q9Y221 FN1-212ENST00000446046 7952 ntTSL 1 (best) BASIC13.47□□□□□ -0.253e-24■□□□□ 11.2
NIP7Q9Y221 FN1-204ENST00000356005 7846 ntTSL 1 (best) BASIC13.11□□□□□ -0.313e-24■□□□□ 11.2
NIP7Q9Y221 FN1-211ENST00000443816 7762 ntTSL 1 (best) BASIC13□□□□□ -0.333e-24■□□□□ 11.2
NIP7Q9Y221 FN1-205ENST00000357867 7898 ntTSL 1 (best) BASIC12.79□□□□□ -0.363e-24■□□□□ 11.2
NIP7Q9Y221 FN1-207ENST00000421182 8103 ntTSL 1 (best) BASIC12.76□□□□□ -0.373e-24■□□□□ 11.2
NIP7Q9Y221 FN1-203ENST00000354785 8905 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.43e-24■□□□□ 11.2
NIP7Q9Y221 FN1-209ENST00000432072 7759 ntTSL 1 (best) BASIC11.69□□□□□ -0.543e-24■□□□□ 11.2
NIP7Q9Y221 HLA-A-207ENST00000495183 1766 nt31.19■■■□□ 2.586e-6■□□□□ 11.1
NIP7Q9Y221 HLA-A-201ENST00000376802 1334 ntBASIC23.16■■□□□ 1.36e-6■□□□□ 11.1
NIP7Q9Y221 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC22.5■■□□□ 1.196e-6■□□□□ 11.1
NIP7Q9Y221 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC21.96■■□□□ 1.116e-6■□□□□ 11.1
NIP7Q9Y221 HLA-A-202ENST00000376806 1854 ntBASIC20.21■□□□□ 0.836e-6■□□□□ 11.1
NIP7Q9Y221 HLA-A-208ENST00000496081 1786 nt20.03■□□□□ 0.86e-6■□□□□ 11.1
NIP7Q9Y221 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.526e-6■□□□□ 11.1
NIP7Q9Y221 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC15.38■□□□□ 0.053e-27■□□□□ 11.1
NIP7Q9Y221 SERPINE1-201ENST00000223095 3190 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.561e-6■□□□□ 11.1
NIP7Q9Y221 AMBP-203ENST00000540645 1356 ntTSL 216.17■□□□□ 0.185e-10■□□□□ 11.1
NIP7Q9Y221 FN1-227ENST00000498719 2433 ntTSL 210.04□□□□□ -0.82e-52■□□□□ 11.1
NIP7Q9Y221 FN1-225ENST00000494446 676 ntTSL 29.3□□□□□ -0.922e-52■□□□□ 11.1
NIP7Q9Y221 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC21.29■■□□□ 13e-33■□□□□ 11
NIP7Q9Y221 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.244e-6■□□□□ 10.9
NIP7Q9Y221 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.784e-6■□□□□ 10.9
NIP7Q9Y221 RPLP0-227ENST00000552902 869 ntTSL 226.17■■□□□ 1.784e-6■□□□□ 10.9
NIP7Q9Y221 RPLP0-222ENST00000551336 406 ntTSL 326.11■■□□□ 1.774e-6■□□□□ 10.9
NIP7Q9Y221 RPLP0-223ENST00000551783 676 ntTSL 225.52■■□□□ 1.684e-6■□□□□ 10.9
NIP7Q9Y221 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.394e-6■□□□□ 10.9
NIP7Q9Y221 ERBB2-211ENST00000582648 1013 ntTSL 523.41■■□□□ 1.344e-6■□□□□ 10.9
NIP7Q9Y221 RPLP0-218ENST00000550856 1003 ntTSL 222.31■■□□□ 1.164e-6■□□□□ 10.9
NIP7Q9Y221 ERBB2-222ENST00000584908 1316 ntTSL 1 (best)21.04■□□□□ 0.964e-6■□□□□ 10.9
NIP7Q9Y221 ERBB2-212ENST00000582788 2004 ntTSL 520.62■□□□□ 0.894e-6■□□□□ 10.9
NIP7Q9Y221 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC20.53■□□□□ 0.884e-6■□□□□ 10.9
NIP7Q9Y221 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC20.48■□□□□ 0.874e-6■□□□□ 10.9
NIP7Q9Y221 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC18.6■□□□□ 0.574e-6■□□□□ 10.9
NIP7Q9Y221 RPLP0-226ENST00000552461 2591 ntTSL 218.45■□□□□ 0.544e-6■□□□□ 10.9
NIP7Q9Y221 RPLP0-206ENST00000546990 770 ntTSL 318.41■□□□□ 0.544e-6■□□□□ 10.9
NIP7Q9Y221 RPLP0-204ENST00000546564 844 ntTSL 216.57■□□□□ 0.244e-6■□□□□ 10.9
NIP7Q9Y221 RPLP0-216ENST00000550296 562 ntTSL 216.57■□□□□ 0.244e-6■□□□□ 10.9
NIP7Q9Y221 CYB5R3-208ENST00000470741 3938 ntTSL 1 (best)15.67■□□□□ 0.14e-6■□□□□ 10.9
NIP7Q9Y221 RPLP0-215ENST00000549242 518 ntTSL 215.45■□□□□ 0.064e-6■□□□□ 10.9
NIP7Q9Y221 RPLP0-205ENST00000546989 993 ntTSL 5 BASIC15.45■□□□□ 0.064e-6■□□□□ 10.9
NIP7Q9Y221 RPLP0-209ENST00000547211 781 ntTSL 315.45■□□□□ 0.064e-6■□□□□ 10.9
NIP7Q9Y221 ERBB2-203ENST00000445658 3238 ntTSL 2 BASIC14.54□□□□□ -0.084e-6■□□□□ 10.9
NIP7Q9Y221 RPLP0-214ENST00000549098 1106 ntTSL 214.31□□□□□ -0.124e-6■□□□□ 10.9
NIP7Q9Y221 RPLP0-217ENST00000550423 561 ntTSL 314.26□□□□□ -0.134e-6■□□□□ 10.9
NIP7Q9Y221 RPLP0-203ENST00000392514 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.134e-6■□□□□ 10.9
NIP7Q9Y221 ERBB2-202ENST00000406381 4564 ntTSL 5 BASIC14.2□□□□□ -0.144e-6■□□□□ 10.9
NIP7Q9Y221 ERBB2-219ENST00000584601 4792 ntTSL 2 BASIC13.99□□□□□ -0.174e-6■□□□□ 10.9
NIP7Q9Y221 ERBB2-218ENST00000584450 3730 ntTSL 1 (best) BASIC13.9□□□□□ -0.184e-6■□□□□ 10.9
NIP7Q9Y221 ERBB2-206ENST00000578373 4523 ntTSL 1 (best)13.75□□□□□ -0.214e-6■□□□□ 10.9
NIP7Q9Y221 RPLP0-202ENST00000313104 912 ntTSL 1 (best) BASIC13.64□□□□□ -0.234e-6■□□□□ 10.9
Retrieved 100 of 1,619 protein–RNA pairs in 64.9 ms