Protein–RNA interactions for Protein: Q9ULE3

DENND2A, DENN domain-containing protein 2A, humanhuman

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND2AQ9ULE3 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
DENND2AQ9ULE3 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
DENND2AQ9ULE3 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC30.48■■■□□ 2.47
DENND2AQ9ULE3 MOB2-207ENST00000614710 705 ntTSL 5 BASIC30.48■■■□□ 2.47
DENND2AQ9ULE3 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC30.48■■■□□ 2.47
DENND2AQ9ULE3 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC30.47■■■□□ 2.47
DENND2AQ9ULE3 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
DENND2AQ9ULE3 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
DENND2AQ9ULE3 AL157400.5-201ENST00000507624 621 ntBASIC30.47■■■□□ 2.47
DENND2AQ9ULE3 NTF6A-201ENST00000591175 560 ntBASIC30.47■■■□□ 2.47
DENND2AQ9ULE3 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC30.46■■■□□ 2.47
DENND2AQ9ULE3 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC30.46■■■□□ 2.47
DENND2AQ9ULE3 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
DENND2AQ9ULE3 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC30.46■■■□□ 2.47
DENND2AQ9ULE3 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC30.45■■■□□ 2.47
DENND2AQ9ULE3 AL359258.2-201ENST00000564063 1566 ntBASIC30.45■■■□□ 2.47
DENND2AQ9ULE3 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC30.45■■■□□ 2.47
DENND2AQ9ULE3 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC30.45■■■□□ 2.47
DENND2AQ9ULE3 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC30.45■■■□□ 2.46
DENND2AQ9ULE3 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
DENND2AQ9ULE3 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
DENND2AQ9ULE3 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
DENND2AQ9ULE3 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
DENND2AQ9ULE3 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC30.43■■■□□ 2.46
DENND2AQ9ULE3 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
DENND2AQ9ULE3 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
DENND2AQ9ULE3 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC30.42■■■□□ 2.46
DENND2AQ9ULE3 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC30.42■■■□□ 2.46
DENND2AQ9ULE3 AC018358.1-201ENST00000631079 1402 ntBASIC30.41■■■□□ 2.46
DENND2AQ9ULE3 HYI-213ENST00000583037 1322 ntTSL 5 BASIC30.41■■■□□ 2.46
DENND2AQ9ULE3 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC30.4■■■□□ 2.46
DENND2AQ9ULE3 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC30.4■■■□□ 2.46
DENND2AQ9ULE3 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC30.4■■■□□ 2.46
DENND2AQ9ULE3 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
DENND2AQ9ULE3 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC30.38■■■□□ 2.45
DENND2AQ9ULE3 SHF-206ENST00000560471 2499 ntTSL 5 BASIC30.38■■■□□ 2.45
DENND2AQ9ULE3 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC30.38■■■□□ 2.45
DENND2AQ9ULE3 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC30.38■■■□□ 2.45
DENND2AQ9ULE3 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
DENND2AQ9ULE3 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC30.37■■■□□ 2.45
DENND2AQ9ULE3 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
DENND2AQ9ULE3 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC30.37■■■□□ 2.45
DENND2AQ9ULE3 U85056.1-201ENST00000616429 682 ntBASIC30.37■■■□□ 2.45
DENND2AQ9ULE3 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
DENND2AQ9ULE3 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
DENND2AQ9ULE3 PROC-203ENST00000409048 1586 ntTSL 5 BASIC30.37■■■□□ 2.45
DENND2AQ9ULE3 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
DENND2AQ9ULE3 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
DENND2AQ9ULE3 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
DENND2AQ9ULE3 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
DENND2AQ9ULE3 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
DENND2AQ9ULE3 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC30.34■■■□□ 2.45
DENND2AQ9ULE3 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC30.34■■■□□ 2.45
DENND2AQ9ULE3 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC30.34■■■□□ 2.45
DENND2AQ9ULE3 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC30.34■■■□□ 2.45
DENND2AQ9ULE3 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC30.33■■■□□ 2.45
DENND2AQ9ULE3 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC30.33■■■□□ 2.45
DENND2AQ9ULE3 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC30.32■■■□□ 2.45
DENND2AQ9ULE3 REST-210ENST00000638187 1334 ntTSL 5 BASIC30.32■■■□□ 2.44
DENND2AQ9ULE3 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC30.32■■■□□ 2.44
DENND2AQ9ULE3 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
DENND2AQ9ULE3 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
DENND2AQ9ULE3 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
DENND2AQ9ULE3 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC30.31■■■□□ 2.44
DENND2AQ9ULE3 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
DENND2AQ9ULE3 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC30.3■■■□□ 2.44
DENND2AQ9ULE3 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
DENND2AQ9ULE3 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
DENND2AQ9ULE3 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
DENND2AQ9ULE3 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
DENND2AQ9ULE3 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC30.29■■■□□ 2.44
DENND2AQ9ULE3 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
DENND2AQ9ULE3 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
DENND2AQ9ULE3 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC30.28■■■□□ 2.44
DENND2AQ9ULE3 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC30.28■■■□□ 2.44
DENND2AQ9ULE3 SMPD5-203ENST00000639008 1464 ntBASIC30.28■■■□□ 2.44
DENND2AQ9ULE3 AC007029.1-201ENST00000604183 313 ntBASIC30.28■■■□□ 2.44
DENND2AQ9ULE3 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC30.28■■■□□ 2.44
DENND2AQ9ULE3 AC012354.3-201ENST00000623734 483 ntBASIC30.28■■■□□ 2.44
DENND2AQ9ULE3 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
DENND2AQ9ULE3 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
DENND2AQ9ULE3 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC30.27■■■□□ 2.44
DENND2AQ9ULE3 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
DENND2AQ9ULE3 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC30.27■■■□□ 2.44
DENND2AQ9ULE3 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
DENND2AQ9ULE3 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC30.25■■■□□ 2.43
DENND2AQ9ULE3 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
DENND2AQ9ULE3 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC30.25■■■□□ 2.43
DENND2AQ9ULE3 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC30.24■■■□□ 2.43
DENND2AQ9ULE3 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
DENND2AQ9ULE3 AC025884.2-201ENST00000553429 711 ntBASIC30.24■■■□□ 2.43
DENND2AQ9ULE3 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
DENND2AQ9ULE3 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC30.24■■■□□ 2.43
DENND2AQ9ULE3 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC30.24■■■□□ 2.43
DENND2AQ9ULE3 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC30.24■■■□□ 2.43
DENND2AQ9ULE3 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC30.22■■■□□ 2.43
DENND2AQ9ULE3 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
DENND2AQ9ULE3 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
DENND2AQ9ULE3 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC30.22■■■□□ 2.43
DENND2AQ9ULE3 DRD5P2-201ENST00000421395 2012 ntBASIC30.22■■■□□ 2.43
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms