Protein–RNA interactions for Protein: Q9UHD9

UBQLN2, Ubiquilin-2, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN2Q9UHD9 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
UBQLN2Q9UHD9 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
UBQLN2Q9UHD9 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
UBQLN2Q9UHD9 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
UBQLN2Q9UHD9 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.86■□□□□ 0.93
UBQLN2Q9UHD9 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
UBQLN2Q9UHD9 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC20.86■□□□□ 0.93
UBQLN2Q9UHD9 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.86■□□□□ 0.93
UBQLN2Q9UHD9 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.85■□□□□ 0.93
UBQLN2Q9UHD9 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
UBQLN2Q9UHD9 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
UBQLN2Q9UHD9 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
UBQLN2Q9UHD9 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
UBQLN2Q9UHD9 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
UBQLN2Q9UHD9 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
UBQLN2Q9UHD9 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
UBQLN2Q9UHD9 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
UBQLN2Q9UHD9 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
UBQLN2Q9UHD9 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
UBQLN2Q9UHD9 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC20.84■□□□□ 0.93
UBQLN2Q9UHD9 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
UBQLN2Q9UHD9 AC079834.2-201ENST00000609776 1949 ntBASIC20.84■□□□□ 0.93
UBQLN2Q9UHD9 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
UBQLN2Q9UHD9 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
UBQLN2Q9UHD9 RARRES2P7-201ENST00000567349 469 ntBASIC20.82■□□□□ 0.92
UBQLN2Q9UHD9 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC20.82■□□□□ 0.92
UBQLN2Q9UHD9 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
UBQLN2Q9UHD9 CLDN5-201ENST00000403084 2357 ntBASIC20.82■□□□□ 0.92
UBQLN2Q9UHD9 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC20.82■□□□□ 0.92
UBQLN2Q9UHD9 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
UBQLN2Q9UHD9 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
UBQLN2Q9UHD9 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC20.81■□□□□ 0.92
UBQLN2Q9UHD9 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC20.81■□□□□ 0.92
UBQLN2Q9UHD9 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC20.81■□□□□ 0.92
UBQLN2Q9UHD9 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
UBQLN2Q9UHD9 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
UBQLN2Q9UHD9 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
UBQLN2Q9UHD9 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
UBQLN2Q9UHD9 KLF16-203ENST00000592313 508 ntTSL 3 BASIC20.8■□□□□ 0.92
UBQLN2Q9UHD9 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
UBQLN2Q9UHD9 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.8■□□□□ 0.92
UBQLN2Q9UHD9 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
UBQLN2Q9UHD9 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
UBQLN2Q9UHD9 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
UBQLN2Q9UHD9 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.79■□□□□ 0.92
UBQLN2Q9UHD9 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC20.79■□□□□ 0.92
UBQLN2Q9UHD9 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
UBQLN2Q9UHD9 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
UBQLN2Q9UHD9 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC20.78■□□□□ 0.92
UBQLN2Q9UHD9 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
UBQLN2Q9UHD9 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
UBQLN2Q9UHD9 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC20.77■□□□□ 0.92
UBQLN2Q9UHD9 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
UBQLN2Q9UHD9 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
UBQLN2Q9UHD9 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.77■□□□□ 0.92
UBQLN2Q9UHD9 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
UBQLN2Q9UHD9 DUSP8P4-201ENST00000399538 1761 ntBASIC20.76■□□□□ 0.91
UBQLN2Q9UHD9 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
UBQLN2Q9UHD9 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
UBQLN2Q9UHD9 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
UBQLN2Q9UHD9 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
UBQLN2Q9UHD9 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
UBQLN2Q9UHD9 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
UBQLN2Q9UHD9 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
UBQLN2Q9UHD9 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
UBQLN2Q9UHD9 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
UBQLN2Q9UHD9 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
UBQLN2Q9UHD9 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
UBQLN2Q9UHD9 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
UBQLN2Q9UHD9 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
UBQLN2Q9UHD9 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
UBQLN2Q9UHD9 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
UBQLN2Q9UHD9 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
UBQLN2Q9UHD9 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20.73■□□□□ 0.91
UBQLN2Q9UHD9 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.73■□□□□ 0.91
UBQLN2Q9UHD9 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
UBQLN2Q9UHD9 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC20.73■□□□□ 0.91
UBQLN2Q9UHD9 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
UBQLN2Q9UHD9 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC20.72■□□□□ 0.91
UBQLN2Q9UHD9 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC20.72■□□□□ 0.91
UBQLN2Q9UHD9 ERN1-208ENST00000606895 2068 ntBASIC20.71■□□□□ 0.91
UBQLN2Q9UHD9 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
UBQLN2Q9UHD9 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
UBQLN2Q9UHD9 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
UBQLN2Q9UHD9 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC20.71■□□□□ 0.91
UBQLN2Q9UHD9 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.91
UBQLN2Q9UHD9 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
UBQLN2Q9UHD9 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
UBQLN2Q9UHD9 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
UBQLN2Q9UHD9 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC20.7■□□□□ 0.9
UBQLN2Q9UHD9 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
UBQLN2Q9UHD9 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
UBQLN2Q9UHD9 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
UBQLN2Q9UHD9 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
UBQLN2Q9UHD9 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
UBQLN2Q9UHD9 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.69■□□□□ 0.9
UBQLN2Q9UHD9 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
UBQLN2Q9UHD9 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
UBQLN2Q9UHD9 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
UBQLN2Q9UHD9 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms