Protein–RNA interactions for Protein: Q9NZI2

KCNIP1, Kv channel-interacting protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP1Q9NZI2 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC20.81■□□□□ 0.92
KCNIP1Q9NZI2 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
KCNIP1Q9NZI2 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
KCNIP1Q9NZI2 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
KCNIP1Q9NZI2 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
KCNIP1Q9NZI2 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
KCNIP1Q9NZI2 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
KCNIP1Q9NZI2 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
KCNIP1Q9NZI2 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC20.8■□□□□ 0.92
KCNIP1Q9NZI2 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC20.8■□□□□ 0.92
KCNIP1Q9NZI2 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC20.79■□□□□ 0.92
KCNIP1Q9NZI2 PKM-203ENST00000389093 2279 ntTSL 5 BASIC20.79■□□□□ 0.92
KCNIP1Q9NZI2 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC20.78■□□□□ 0.92
KCNIP1Q9NZI2 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
KCNIP1Q9NZI2 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
KCNIP1Q9NZI2 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
KCNIP1Q9NZI2 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC20.77■□□□□ 0.92
KCNIP1Q9NZI2 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
KCNIP1Q9NZI2 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
KCNIP1Q9NZI2 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
KCNIP1Q9NZI2 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
KCNIP1Q9NZI2 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC20.76■□□□□ 0.91
KCNIP1Q9NZI2 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
KCNIP1Q9NZI2 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
KCNIP1Q9NZI2 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
KCNIP1Q9NZI2 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
KCNIP1Q9NZI2 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
KCNIP1Q9NZI2 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
KCNIP1Q9NZI2 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
KCNIP1Q9NZI2 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
KCNIP1Q9NZI2 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
KCNIP1Q9NZI2 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC20.74■□□□□ 0.91
KCNIP1Q9NZI2 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
KCNIP1Q9NZI2 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC20.73■□□□□ 0.91
KCNIP1Q9NZI2 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
KCNIP1Q9NZI2 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
KCNIP1Q9NZI2 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC20.73■□□□□ 0.91
KCNIP1Q9NZI2 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KCNIP1Q9NZI2 PEX7-203ENST00000541292 945 ntTSL 5 BASIC20.72■□□□□ 0.91
KCNIP1Q9NZI2 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
KCNIP1Q9NZI2 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC20.72■□□□□ 0.91
KCNIP1Q9NZI2 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KCNIP1Q9NZI2 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
KCNIP1Q9NZI2 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC20.71■□□□□ 0.91
KCNIP1Q9NZI2 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC20.7■□□□□ 0.9
KCNIP1Q9NZI2 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
KCNIP1Q9NZI2 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
KCNIP1Q9NZI2 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC20.69■□□□□ 0.9
KCNIP1Q9NZI2 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC20.69■□□□□ 0.9
KCNIP1Q9NZI2 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
KCNIP1Q9NZI2 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
KCNIP1Q9NZI2 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC20.69■□□□□ 0.9
KCNIP1Q9NZI2 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
KCNIP1Q9NZI2 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
KCNIP1Q9NZI2 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
KCNIP1Q9NZI2 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
KCNIP1Q9NZI2 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC20.69■□□□□ 0.9
KCNIP1Q9NZI2 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
KCNIP1Q9NZI2 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC20.68■□□□□ 0.9
KCNIP1Q9NZI2 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC20.68■□□□□ 0.9
KCNIP1Q9NZI2 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
KCNIP1Q9NZI2 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC20.68■□□□□ 0.9
KCNIP1Q9NZI2 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
KCNIP1Q9NZI2 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC20.67■□□□□ 0.9
KCNIP1Q9NZI2 RPS2P35-201ENST00000443417 897 ntBASIC20.67■□□□□ 0.9
KCNIP1Q9NZI2 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC20.67■□□□□ 0.9
KCNIP1Q9NZI2 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC20.67■□□□□ 0.9
KCNIP1Q9NZI2 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC20.66■□□□□ 0.9
KCNIP1Q9NZI2 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
KCNIP1Q9NZI2 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC20.66■□□□□ 0.9
KCNIP1Q9NZI2 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
KCNIP1Q9NZI2 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC20.66■□□□□ 0.9
KCNIP1Q9NZI2 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC20.66■□□□□ 0.9
KCNIP1Q9NZI2 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
KCNIP1Q9NZI2 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
KCNIP1Q9NZI2 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
KCNIP1Q9NZI2 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
KCNIP1Q9NZI2 HGH1-207ENST00000628266 258 ntTSL 5 BASIC20.65■□□□□ 0.9
KCNIP1Q9NZI2 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC20.65■□□□□ 0.9
KCNIP1Q9NZI2 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
KCNIP1Q9NZI2 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
KCNIP1Q9NZI2 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC20.64■□□□□ 0.9
KCNIP1Q9NZI2 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
KCNIP1Q9NZI2 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
KCNIP1Q9NZI2 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
KCNIP1Q9NZI2 AL449106.1-201ENST00000608517 1980 ntBASIC20.64■□□□□ 0.89
KCNIP1Q9NZI2 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
KCNIP1Q9NZI2 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
KCNIP1Q9NZI2 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
KCNIP1Q9NZI2 AP004609.3-201ENST00000610705 1884 ntBASIC20.63■□□□□ 0.89
KCNIP1Q9NZI2 RPS2-210ENST00000530225 765 ntTSL 2 BASIC20.63■□□□□ 0.89
KCNIP1Q9NZI2 LINC01971-201ENST00000617888 1048 ntBASIC20.63■□□□□ 0.89
KCNIP1Q9NZI2 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
KCNIP1Q9NZI2 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC20.63■□□□□ 0.89
KCNIP1Q9NZI2 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
KCNIP1Q9NZI2 SHF-207ENST00000560540 2062 ntTSL 5 BASIC20.62■□□□□ 0.89
KCNIP1Q9NZI2 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC20.62■□□□□ 0.89
KCNIP1Q9NZI2 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
KCNIP1Q9NZI2 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KCNIP1Q9NZI2 CHML-204ENST00000638121 920 ntTSL 2 BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms