Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
LIN7CQ9NUP9 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LIN7CQ9NUP9 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
LIN7CQ9NUP9 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LIN7CQ9NUP9 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
LIN7CQ9NUP9 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
LIN7CQ9NUP9 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC20.57■□□□□ 0.88
LIN7CQ9NUP9 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
LIN7CQ9NUP9 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
LIN7CQ9NUP9 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LIN7CQ9NUP9 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LIN7CQ9NUP9 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LIN7CQ9NUP9 LINC00273-201ENST00000539813 1452 ntBASIC20.56■□□□□ 0.88
LIN7CQ9NUP9 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LIN7CQ9NUP9 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
LIN7CQ9NUP9 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LIN7CQ9NUP9 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC20.56■□□□□ 0.88
LIN7CQ9NUP9 CALM3-209ENST00000597743 577 ntTSL 4 BASIC20.56■□□□□ 0.88
LIN7CQ9NUP9 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LIN7CQ9NUP9 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
LIN7CQ9NUP9 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LIN7CQ9NUP9 AL449106.1-201ENST00000608517 1980 ntBASIC20.55■□□□□ 0.88
LIN7CQ9NUP9 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LIN7CQ9NUP9 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LIN7CQ9NUP9 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
LIN7CQ9NUP9 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
LIN7CQ9NUP9 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LIN7CQ9NUP9 WHAMMP2-203ENST00000563942 1603 ntBASIC20.54■□□□□ 0.88
LIN7CQ9NUP9 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC20.54■□□□□ 0.88
LIN7CQ9NUP9 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC20.54■□□□□ 0.88
LIN7CQ9NUP9 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC20.54■□□□□ 0.88
LIN7CQ9NUP9 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
LIN7CQ9NUP9 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LIN7CQ9NUP9 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LIN7CQ9NUP9 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LIN7CQ9NUP9 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LIN7CQ9NUP9 ZNRF2P2-203ENST00000454624 420 ntBASIC20.53■□□□□ 0.88
LIN7CQ9NUP9 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC20.53■□□□□ 0.88
LIN7CQ9NUP9 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC20.53■□□□□ 0.88
LIN7CQ9NUP9 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC20.53■□□□□ 0.88
LIN7CQ9NUP9 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC20.53■□□□□ 0.88
LIN7CQ9NUP9 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
LIN7CQ9NUP9 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LIN7CQ9NUP9 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LIN7CQ9NUP9 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LIN7CQ9NUP9 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LIN7CQ9NUP9 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC20.52■□□□□ 0.88
LIN7CQ9NUP9 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LIN7CQ9NUP9 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
LIN7CQ9NUP9 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
LIN7CQ9NUP9 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC20.52■□□□□ 0.87
LIN7CQ9NUP9 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC20.51■□□□□ 0.87
LIN7CQ9NUP9 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LIN7CQ9NUP9 AC091060.1-201ENST00000623524 1766 ntBASIC20.51■□□□□ 0.87
LIN7CQ9NUP9 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LIN7CQ9NUP9 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LIN7CQ9NUP9 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC20.5■□□□□ 0.87
LIN7CQ9NUP9 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
LIN7CQ9NUP9 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC20.5■□□□□ 0.87
LIN7CQ9NUP9 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
LIN7CQ9NUP9 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
LIN7CQ9NUP9 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
LIN7CQ9NUP9 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LIN7CQ9NUP9 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LIN7CQ9NUP9 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LIN7CQ9NUP9 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC20.48■□□□□ 0.87
LIN7CQ9NUP9 LINC01971-201ENST00000617888 1048 ntBASIC20.48■□□□□ 0.87
LIN7CQ9NUP9 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
LIN7CQ9NUP9 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LIN7CQ9NUP9 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LIN7CQ9NUP9 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC20.47■□□□□ 0.87
LIN7CQ9NUP9 AC145676.1-201ENST00000514988 2004 ntBASIC20.46■□□□□ 0.87
LIN7CQ9NUP9 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC20.46■□□□□ 0.87
LIN7CQ9NUP9 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
LIN7CQ9NUP9 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
LIN7CQ9NUP9 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LIN7CQ9NUP9 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LIN7CQ9NUP9 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LIN7CQ9NUP9 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LIN7CQ9NUP9 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LIN7CQ9NUP9 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
LIN7CQ9NUP9 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LIN7CQ9NUP9 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LIN7CQ9NUP9 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LIN7CQ9NUP9 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LIN7CQ9NUP9 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC20.43■□□□□ 0.86
LIN7CQ9NUP9 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
LIN7CQ9NUP9 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC20.42■□□□□ 0.86
LIN7CQ9NUP9 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
LIN7CQ9NUP9 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
LIN7CQ9NUP9 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC20.42■□□□□ 0.86
LIN7CQ9NUP9 MIR7108-201ENST00000614319 87 ntBASIC20.42■□□□□ 0.86
LIN7CQ9NUP9 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC20.42■□□□□ 0.86
LIN7CQ9NUP9 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
LIN7CQ9NUP9 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC20.42■□□□□ 0.86
LIN7CQ9NUP9 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
LIN7CQ9NUP9 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LIN7CQ9NUP9 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC20.41■□□□□ 0.86
LIN7CQ9NUP9 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
LIN7CQ9NUP9 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms