Protein–RNA interactions for Protein: Q9HCL0

PCDH18, Protocadherin-18, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH18Q9HCL0 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
PCDH18Q9HCL0 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC25.89■■□□□ 1.74
PCDH18Q9HCL0 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
PCDH18Q9HCL0 CR559946.2-201ENST00000623684 991 ntBASIC25.89■■□□□ 1.74
PCDH18Q9HCL0 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC25.89■■□□□ 1.73
PCDH18Q9HCL0 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC25.88■■□□□ 1.73
PCDH18Q9HCL0 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
PCDH18Q9HCL0 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC25.87■■□□□ 1.73
PCDH18Q9HCL0 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
PCDH18Q9HCL0 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC25.87■■□□□ 1.73
PCDH18Q9HCL0 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
PCDH18Q9HCL0 AGPS-202ENST00000409888 815 ntTSL 4 BASIC25.87■■□□□ 1.73
PCDH18Q9HCL0 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
PCDH18Q9HCL0 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC25.86■■□□□ 1.73
PCDH18Q9HCL0 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
PCDH18Q9HCL0 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC25.86■■□□□ 1.73
PCDH18Q9HCL0 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC25.86■■□□□ 1.73
PCDH18Q9HCL0 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC25.86■■□□□ 1.73
PCDH18Q9HCL0 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
PCDH18Q9HCL0 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
PCDH18Q9HCL0 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
PCDH18Q9HCL0 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC25.85■■□□□ 1.73
PCDH18Q9HCL0 PKM-203ENST00000389093 2279 ntTSL 5 BASIC25.85■■□□□ 1.73
PCDH18Q9HCL0 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
PCDH18Q9HCL0 AC008813.1-201ENST00000536597 885 ntBASIC25.84■■□□□ 1.73
PCDH18Q9HCL0 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC25.84■■□□□ 1.73
PCDH18Q9HCL0 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
PCDH18Q9HCL0 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC25.83■■□□□ 1.73
PCDH18Q9HCL0 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC25.83■■□□□ 1.73
PCDH18Q9HCL0 AL449106.1-201ENST00000608517 1980 ntBASIC25.82■■□□□ 1.72
PCDH18Q9HCL0 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
PCDH18Q9HCL0 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
PCDH18Q9HCL0 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
PCDH18Q9HCL0 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
PCDH18Q9HCL0 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
PCDH18Q9HCL0 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC25.81■■□□□ 1.72
PCDH18Q9HCL0 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
PCDH18Q9HCL0 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC25.81■■□□□ 1.72
PCDH18Q9HCL0 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC25.81■■□□□ 1.72
PCDH18Q9HCL0 HLA-V-202ENST00000446817 847 ntBASIC25.81■■□□□ 1.72
PCDH18Q9HCL0 MIR3648-2-201ENST00000581792 180 ntBASIC25.81■■□□□ 1.72
PCDH18Q9HCL0 MIR3648-1-201ENST00000615959 180 ntBASIC25.81■■□□□ 1.72
PCDH18Q9HCL0 GDI1-215ENST00000630693 786 ntTSL 4 BASIC25.81■■□□□ 1.72
PCDH18Q9HCL0 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC25.81■■□□□ 1.72
PCDH18Q9HCL0 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
PCDH18Q9HCL0 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC25.81■■□□□ 1.72
PCDH18Q9HCL0 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC25.81■■□□□ 1.72
PCDH18Q9HCL0 MACF1-219ENST00000484793 834 ntTSL 2 BASIC25.8■■□□□ 1.72
PCDH18Q9HCL0 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC25.8■■□□□ 1.72
PCDH18Q9HCL0 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
PCDH18Q9HCL0 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC25.79■■□□□ 1.72
PCDH18Q9HCL0 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
PCDH18Q9HCL0 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC25.78■■□□□ 1.72
PCDH18Q9HCL0 WHAMMP3-201ENST00000611636 1609 ntBASIC25.78■■□□□ 1.72
PCDH18Q9HCL0 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC25.78■■□□□ 1.72
PCDH18Q9HCL0 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC25.78■■□□□ 1.72
PCDH18Q9HCL0 AC148477.6-201ENST00000623746 465 ntBASIC25.78■■□□□ 1.72
PCDH18Q9HCL0 MIR219A2-201ENST00000608502 1504 ntBASIC25.78■■□□□ 1.72
PCDH18Q9HCL0 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
PCDH18Q9HCL0 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
PCDH18Q9HCL0 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
PCDH18Q9HCL0 MIR7108-201ENST00000614319 87 ntBASIC25.77■■□□□ 1.72
PCDH18Q9HCL0 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC25.77■■□□□ 1.72
PCDH18Q9HCL0 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
PCDH18Q9HCL0 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
PCDH18Q9HCL0 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC25.76■■□□□ 1.71
PCDH18Q9HCL0 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC25.76■■□□□ 1.71
PCDH18Q9HCL0 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
PCDH18Q9HCL0 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
PCDH18Q9HCL0 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC25.75■■□□□ 1.71
PCDH18Q9HCL0 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC25.75■■□□□ 1.71
PCDH18Q9HCL0 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
PCDH18Q9HCL0 CHST11-203ENST00000547956 936 ntTSL 2 BASIC25.75■■□□□ 1.71
PCDH18Q9HCL0 AC016575.1-201ENST00000607026 382 ntBASIC25.75■■□□□ 1.71
PCDH18Q9HCL0 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC25.75■■□□□ 1.71
PCDH18Q9HCL0 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC25.74■■□□□ 1.71
PCDH18Q9HCL0 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC25.74■■□□□ 1.71
PCDH18Q9HCL0 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC25.73■■□□□ 1.71
PCDH18Q9HCL0 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
PCDH18Q9HCL0 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
PCDH18Q9HCL0 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC25.73■■□□□ 1.71
PCDH18Q9HCL0 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
PCDH18Q9HCL0 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC25.72■■□□□ 1.71
PCDH18Q9HCL0 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC25.72■■□□□ 1.71
PCDH18Q9HCL0 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
PCDH18Q9HCL0 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC25.71■■□□□ 1.71
PCDH18Q9HCL0 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC25.71■■□□□ 1.71
PCDH18Q9HCL0 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC25.7■■□□□ 1.71
PCDH18Q9HCL0 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC25.7■■□□□ 1.7
PCDH18Q9HCL0 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
PCDH18Q9HCL0 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC25.7■■□□□ 1.7
PCDH18Q9HCL0 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC25.69■■□□□ 1.7
PCDH18Q9HCL0 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
PCDH18Q9HCL0 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC25.69■■□□□ 1.7
PCDH18Q9HCL0 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
PCDH18Q9HCL0 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
PCDH18Q9HCL0 AP004609.3-201ENST00000610705 1884 ntBASIC25.69■■□□□ 1.7
PCDH18Q9HCL0 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC25.69■■□□□ 1.7
PCDH18Q9HCL0 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC25.69■■□□□ 1.7
PCDH18Q9HCL0 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms