Protein–RNA interactions for Protein: Q9C029

TRIM7, E3 ubiquitin-protein ligase TRIM7, humanhuman

Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM7Q9C029 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC26.35■■□□□ 1.81
TRIM7Q9C029 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
TRIM7Q9C029 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC26.35■■□□□ 1.81
TRIM7Q9C029 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
TRIM7Q9C029 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
TRIM7Q9C029 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
TRIM7Q9C029 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC26.34■■□□□ 1.81
TRIM7Q9C029 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC26.34■■□□□ 1.81
TRIM7Q9C029 LINC01971-201ENST00000617888 1048 ntBASIC26.34■■□□□ 1.81
TRIM7Q9C029 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC26.34■■□□□ 1.81
TRIM7Q9C029 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
TRIM7Q9C029 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC26.34■■□□□ 1.81
TRIM7Q9C029 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC26.33■■□□□ 1.81
TRIM7Q9C029 CHML-204ENST00000638121 920 ntTSL 2 BASIC26.33■■□□□ 1.81
TRIM7Q9C029 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC26.33■■□□□ 1.8
TRIM7Q9C029 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC26.32■■□□□ 1.8
TRIM7Q9C029 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC26.32■■□□□ 1.8
TRIM7Q9C029 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC26.32■■□□□ 1.8
TRIM7Q9C029 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC26.32■■□□□ 1.8
TRIM7Q9C029 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC26.32■■□□□ 1.8
TRIM7Q9C029 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC26.31■■□□□ 1.8
TRIM7Q9C029 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
TRIM7Q9C029 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
TRIM7Q9C029 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC26.3■■□□□ 1.8
TRIM7Q9C029 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
TRIM7Q9C029 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
TRIM7Q9C029 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
TRIM7Q9C029 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC26.29■■□□□ 1.8
TRIM7Q9C029 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
TRIM7Q9C029 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC26.28■■□□□ 1.8
TRIM7Q9C029 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
TRIM7Q9C029 MLEC-202ENST00000412616 841 ntTSL 3 BASIC26.28■■□□□ 1.8
TRIM7Q9C029 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC26.28■■□□□ 1.8
TRIM7Q9C029 ZNRF2P2-203ENST00000454624 420 ntBASIC26.28■■□□□ 1.8
TRIM7Q9C029 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC26.28■■□□□ 1.8
TRIM7Q9C029 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
TRIM7Q9C029 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
TRIM7Q9C029 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC26.27■■□□□ 1.8
TRIM7Q9C029 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC26.27■■□□□ 1.8
TRIM7Q9C029 AL449106.1-201ENST00000608517 1980 ntBASIC26.26■■□□□ 1.79
TRIM7Q9C029 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
TRIM7Q9C029 DUX4L13-201ENST00000554103 1267 ntBASIC26.26■■□□□ 1.79
TRIM7Q9C029 DUX4L15-201ENST00000611059 1267 ntBASIC26.26■■□□□ 1.79
TRIM7Q9C029 DUX4L11-201ENST00000611504 1267 ntBASIC26.26■■□□□ 1.79
TRIM7Q9C029 DUX4L12-201ENST00000614593 1267 ntBASIC26.26■■□□□ 1.79
TRIM7Q9C029 DUX4L23-201ENST00000615195 1269 ntBASIC26.26■■□□□ 1.79
TRIM7Q9C029 DUX4L24-201ENST00000617576 1269 ntBASIC26.26■■□□□ 1.79
TRIM7Q9C029 DUX4L22-201ENST00000618238 1269 ntBASIC26.26■■□□□ 1.79
TRIM7Q9C029 DUX4L20-201ENST00000619712 1269 ntBASIC26.26■■□□□ 1.79
TRIM7Q9C029 DUX4L14-201ENST00000621227 1267 ntBASIC26.26■■□□□ 1.79
TRIM7Q9C029 DUX4L21-201ENST00000622058 1269 ntBASIC26.26■■□□□ 1.79
TRIM7Q9C029 DUX4L10-201ENST00000622460 1267 ntBASIC26.26■■□□□ 1.79
TRIM7Q9C029 DUX4L25-201ENST00000624915 1269 ntBASIC26.26■■□□□ 1.79
TRIM7Q9C029 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
TRIM7Q9C029 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
TRIM7Q9C029 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
TRIM7Q9C029 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
TRIM7Q9C029 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
TRIM7Q9C029 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC26.24■■□□□ 1.79
TRIM7Q9C029 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC26.24■■□□□ 1.79
TRIM7Q9C029 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC26.23■■□□□ 1.79
TRIM7Q9C029 RPS2-210ENST00000530225 765 ntTSL 2 BASIC26.23■■□□□ 1.79
TRIM7Q9C029 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
TRIM7Q9C029 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC26.23■■□□□ 1.79
TRIM7Q9C029 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
TRIM7Q9C029 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
TRIM7Q9C029 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC26.21■■□□□ 1.79
TRIM7Q9C029 CREM-210ENST00000374721 2020 ntTSL 5 BASIC26.21■■□□□ 1.79
TRIM7Q9C029 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC26.21■■□□□ 1.79
TRIM7Q9C029 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC26.21■■□□□ 1.79
TRIM7Q9C029 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC26.21■■□□□ 1.79
TRIM7Q9C029 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
TRIM7Q9C029 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
TRIM7Q9C029 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
TRIM7Q9C029 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
TRIM7Q9C029 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
TRIM7Q9C029 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC26.19■■□□□ 1.78
TRIM7Q9C029 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC26.19■■□□□ 1.78
TRIM7Q9C029 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC26.19■■□□□ 1.78
TRIM7Q9C029 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
TRIM7Q9C029 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
TRIM7Q9C029 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
TRIM7Q9C029 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC26.19■■□□□ 1.78
TRIM7Q9C029 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC26.18■■□□□ 1.78
TRIM7Q9C029 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC26.18■■□□□ 1.78
TRIM7Q9C029 ABHD17AP4-201ENST00000411545 909 ntBASIC26.18■■□□□ 1.78
TRIM7Q9C029 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC26.18■■□□□ 1.78
TRIM7Q9C029 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
TRIM7Q9C029 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
TRIM7Q9C029 AC135731.1-201ENST00000569415 2548 ntBASIC26.17■■□□□ 1.78
TRIM7Q9C029 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
TRIM7Q9C029 CHST11-202ENST00000546689 756 ntTSL 2 BASIC26.17■■□□□ 1.78
TRIM7Q9C029 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
TRIM7Q9C029 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC26.16■■□□□ 1.78
TRIM7Q9C029 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
TRIM7Q9C029 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
TRIM7Q9C029 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
TRIM7Q9C029 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC26.16■■□□□ 1.78
TRIM7Q9C029 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
TRIM7Q9C029 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms