Protein–RNA interactions for Protein: Q96BD0

SLCO4A1, Solute carrier organic anion transporter family member 4A1, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLCO4A1Q96BD0 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
SLCO4A1Q96BD0 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
SLCO4A1Q96BD0 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
SLCO4A1Q96BD0 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.34
SLCO4A1Q96BD0 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
SLCO4A1Q96BD0 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC23.39■■□□□ 1.33
SLCO4A1Q96BD0 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC23.38■■□□□ 1.33
SLCO4A1Q96BD0 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
SLCO4A1Q96BD0 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
SLCO4A1Q96BD0 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
SLCO4A1Q96BD0 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC23.38■■□□□ 1.33
SLCO4A1Q96BD0 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
SLCO4A1Q96BD0 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
SLCO4A1Q96BD0 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC23.37■■□□□ 1.33
SLCO4A1Q96BD0 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SLCO4A1Q96BD0 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC23.36■■□□□ 1.33
SLCO4A1Q96BD0 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
SLCO4A1Q96BD0 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SLCO4A1Q96BD0 LTK-203ENST00000453182 2412 ntTSL 2 BASIC23.36■■□□□ 1.33
SLCO4A1Q96BD0 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
SLCO4A1Q96BD0 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SLCO4A1Q96BD0 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
SLCO4A1Q96BD0 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SLCO4A1Q96BD0 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
SLCO4A1Q96BD0 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
SLCO4A1Q96BD0 SETD8P1-201ENST00000623146 1180 ntBASIC23.35■■□□□ 1.33
SLCO4A1Q96BD0 AP004609.3-201ENST00000610705 1884 ntBASIC23.34■■□□□ 1.33
SLCO4A1Q96BD0 AC135983.2-203ENST00000454486 1613 ntBASIC23.34■■□□□ 1.33
SLCO4A1Q96BD0 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC23.34■■□□□ 1.33
SLCO4A1Q96BD0 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SLCO4A1Q96BD0 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
SLCO4A1Q96BD0 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
SLCO4A1Q96BD0 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
SLCO4A1Q96BD0 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC23.33■■□□□ 1.33
SLCO4A1Q96BD0 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC23.33■■□□□ 1.33
SLCO4A1Q96BD0 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SLCO4A1Q96BD0 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SLCO4A1Q96BD0 ERN1-208ENST00000606895 2068 ntBASIC23.32■■□□□ 1.32
SLCO4A1Q96BD0 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
SLCO4A1Q96BD0 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
SLCO4A1Q96BD0 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
SLCO4A1Q96BD0 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
SLCO4A1Q96BD0 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
SLCO4A1Q96BD0 THRA-202ENST00000394121 2260 ntTSL 2 BASIC23.31■■□□□ 1.32
SLCO4A1Q96BD0 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
SLCO4A1Q96BD0 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SLCO4A1Q96BD0 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SLCO4A1Q96BD0 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SLCO4A1Q96BD0 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SLCO4A1Q96BD0 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SLCO4A1Q96BD0 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC23.28■■□□□ 1.32
SLCO4A1Q96BD0 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
SLCO4A1Q96BD0 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
SLCO4A1Q96BD0 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC23.28■■□□□ 1.32
SLCO4A1Q96BD0 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SLCO4A1Q96BD0 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
SLCO4A1Q96BD0 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
SLCO4A1Q96BD0 WHAMMP2-203ENST00000563942 1603 ntBASIC23.27■■□□□ 1.32
SLCO4A1Q96BD0 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
SLCO4A1Q96BD0 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
SLCO4A1Q96BD0 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
SLCO4A1Q96BD0 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SLCO4A1Q96BD0 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
SLCO4A1Q96BD0 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SLCO4A1Q96BD0 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
SLCO4A1Q96BD0 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SLCO4A1Q96BD0 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SLCO4A1Q96BD0 EBPL-202ENST00000378268 680 ntTSL 3 BASIC23.24■■□□□ 1.31
SLCO4A1Q96BD0 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
SLCO4A1Q96BD0 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
SLCO4A1Q96BD0 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SLCO4A1Q96BD0 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC23.23■■□□□ 1.31
SLCO4A1Q96BD0 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
SLCO4A1Q96BD0 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
SLCO4A1Q96BD0 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SLCO4A1Q96BD0 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
SLCO4A1Q96BD0 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SLCO4A1Q96BD0 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SLCO4A1Q96BD0 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
SLCO4A1Q96BD0 AL391121.1-201ENST00000607967 1349 ntBASIC23.21■■□□□ 1.31
SLCO4A1Q96BD0 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC23.21■■□□□ 1.31
SLCO4A1Q96BD0 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SLCO4A1Q96BD0 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SLCO4A1Q96BD0 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SLCO4A1Q96BD0 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SLCO4A1Q96BD0 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SLCO4A1Q96BD0 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC23.2■■□□□ 1.3
SLCO4A1Q96BD0 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
SLCO4A1Q96BD0 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SLCO4A1Q96BD0 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
SLCO4A1Q96BD0 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC23.19■■□□□ 1.3
SLCO4A1Q96BD0 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC23.19■■□□□ 1.3
SLCO4A1Q96BD0 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC23.19■■□□□ 1.3
SLCO4A1Q96BD0 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC23.19■■□□□ 1.3
SLCO4A1Q96BD0 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
SLCO4A1Q96BD0 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SLCO4A1Q96BD0 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC23.17■■□□□ 1.3
SLCO4A1Q96BD0 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
SLCO4A1Q96BD0 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
SLCO4A1Q96BD0 AC097358.2-201ENST00000607541 1159 ntBASIC23.17■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 10.5 ms