Protein–RNA interactions for Protein: Q969L4

LSM10, U7 snRNA-associated Sm-like protein LSm10, humanhuman

Known RBP Predictions only

Length 123 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM10Q969L4 AC092803.2-201ENST00000564287 1899 ntBASIC20.26■□□□□ 0.83
LSM10Q969L4 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LSM10Q969L4 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LSM10Q969L4 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC20.26■□□□□ 0.83
LSM10Q969L4 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LSM10Q969L4 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LSM10Q969L4 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC20.26■□□□□ 0.83
LSM10Q969L4 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC20.26■□□□□ 0.83
LSM10Q969L4 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LSM10Q969L4 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC20.26■□□□□ 0.83
LSM10Q969L4 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LSM10Q969L4 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
LSM10Q969L4 EI24-212ENST00000615917 1407 ntTSL 2 BASIC20.26■□□□□ 0.83
LSM10Q969L4 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LSM10Q969L4 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
LSM10Q969L4 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LSM10Q969L4 MIR3665-201ENST00000578708 105 ntBASIC20.25■□□□□ 0.83
LSM10Q969L4 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LSM10Q969L4 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LSM10Q969L4 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LSM10Q969L4 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
LSM10Q969L4 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
LSM10Q969L4 DUX4L28-201ENST00000623687 678 ntBASIC20.24■□□□□ 0.83
LSM10Q969L4 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LSM10Q969L4 LINC00273-201ENST00000539813 1452 ntBASIC20.24■□□□□ 0.83
LSM10Q969L4 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LSM10Q969L4 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC20.23■□□□□ 0.83
LSM10Q969L4 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC20.23■□□□□ 0.83
LSM10Q969L4 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LSM10Q969L4 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LSM10Q969L4 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC20.22■□□□□ 0.83
LSM10Q969L4 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LSM10Q969L4 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LSM10Q969L4 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LSM10Q969L4 AP006261.1-201ENST00000584783 668 ntBASIC20.21■□□□□ 0.83
LSM10Q969L4 AP004609.3-201ENST00000610705 1884 ntBASIC20.21■□□□□ 0.83
LSM10Q969L4 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LSM10Q969L4 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
LSM10Q969L4 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC20.2■□□□□ 0.82
LSM10Q969L4 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LSM10Q969L4 MIR6090-201ENST00000622481 60 ntBASIC20.2■□□□□ 0.82
LSM10Q969L4 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.2■□□□□ 0.82
LSM10Q969L4 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LSM10Q969L4 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
LSM10Q969L4 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
LSM10Q969L4 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
LSM10Q969L4 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
LSM10Q969L4 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LSM10Q969L4 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
LSM10Q969L4 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
LSM10Q969L4 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LSM10Q969L4 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
LSM10Q969L4 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LSM10Q969L4 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LSM10Q969L4 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
LSM10Q969L4 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LSM10Q969L4 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LSM10Q969L4 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC20.17■□□□□ 0.82
LSM10Q969L4 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LSM10Q969L4 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LSM10Q969L4 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
LSM10Q969L4 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LSM10Q969L4 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LSM10Q969L4 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC20.15■□□□□ 0.82
LSM10Q969L4 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC20.15■□□□□ 0.82
LSM10Q969L4 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LSM10Q969L4 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
LSM10Q969L4 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LSM10Q969L4 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
LSM10Q969L4 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC20.14■□□□□ 0.81
LSM10Q969L4 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LSM10Q969L4 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LSM10Q969L4 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LSM10Q969L4 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LSM10Q969L4 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
LSM10Q969L4 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC20.13■□□□□ 0.81
LSM10Q969L4 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
LSM10Q969L4 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LSM10Q969L4 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LSM10Q969L4 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
LSM10Q969L4 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC20.12■□□□□ 0.81
LSM10Q969L4 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC20.12■□□□□ 0.81
LSM10Q969L4 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LSM10Q969L4 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC20.12■□□□□ 0.81
LSM10Q969L4 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LSM10Q969L4 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
LSM10Q969L4 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
LSM10Q969L4 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
LSM10Q969L4 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
LSM10Q969L4 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
LSM10Q969L4 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
LSM10Q969L4 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
LSM10Q969L4 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
LSM10Q969L4 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC20.11■□□□□ 0.81
LSM10Q969L4 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC20.11■□□□□ 0.81
LSM10Q969L4 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
LSM10Q969L4 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC20.11■□□□□ 0.81
LSM10Q969L4 AC142472.1-201ENST00000612013 1741 ntBASIC20.1■□□□□ 0.81
LSM10Q969L4 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
LSM10Q969L4 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms