Protein–RNA interactions for Protein: Q8TC12

RDH11, Retinol dehydrogenase 11, humanhuman

Predictions only

Length 318 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11Q8TC12 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
RDH11Q8TC12 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
RDH11Q8TC12 AP004609.3-201ENST00000610705 1884 ntBASIC24.51■■□□□ 1.51
RDH11Q8TC12 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
RDH11Q8TC12 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC24.5■■□□□ 1.51
RDH11Q8TC12 DUSP8P4-201ENST00000399538 1761 ntBASIC24.49■■□□□ 1.51
RDH11Q8TC12 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC24.49■■□□□ 1.51
RDH11Q8TC12 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
RDH11Q8TC12 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
RDH11Q8TC12 AC135731.1-201ENST00000569415 2548 ntBASIC24.49■■□□□ 1.51
RDH11Q8TC12 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
RDH11Q8TC12 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC24.48■■□□□ 1.51
RDH11Q8TC12 AC092803.2-201ENST00000564287 1899 ntBASIC24.48■■□□□ 1.51
RDH11Q8TC12 AP006261.1-201ENST00000584783 668 ntBASIC24.48■■□□□ 1.51
RDH11Q8TC12 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC24.48■■□□□ 1.51
RDH11Q8TC12 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
RDH11Q8TC12 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
RDH11Q8TC12 CIB2-204ENST00000557846 934 ntTSL 3 BASIC24.47■■□□□ 1.51
RDH11Q8TC12 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
RDH11Q8TC12 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
RDH11Q8TC12 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
RDH11Q8TC12 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
RDH11Q8TC12 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC24.45■■□□□ 1.5
RDH11Q8TC12 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC24.45■■□□□ 1.5
RDH11Q8TC12 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC24.45■■□□□ 1.5
RDH11Q8TC12 PEX7-203ENST00000541292 945 ntTSL 5 BASIC24.44■■□□□ 1.5
RDH11Q8TC12 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC24.44■■□□□ 1.5
RDH11Q8TC12 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
RDH11Q8TC12 AC110285.7-201ENST00000624417 1536 ntBASIC24.44■■□□□ 1.5
RDH11Q8TC12 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC24.43■■□□□ 1.5
RDH11Q8TC12 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
RDH11Q8TC12 RPS2P35-201ENST00000443417 897 ntBASIC24.43■■□□□ 1.5
RDH11Q8TC12 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC24.43■■□□□ 1.5
RDH11Q8TC12 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC24.43■■□□□ 1.5
RDH11Q8TC12 AC142472.1-201ENST00000612013 1741 ntBASIC24.42■■□□□ 1.5
RDH11Q8TC12 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC24.42■■□□□ 1.5
RDH11Q8TC12 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
RDH11Q8TC12 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC24.42■■□□□ 1.5
RDH11Q8TC12 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC24.42■■□□□ 1.5
RDH11Q8TC12 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC24.42■■□□□ 1.5
RDH11Q8TC12 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
RDH11Q8TC12 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
RDH11Q8TC12 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
RDH11Q8TC12 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC24.41■■□□□ 1.5
RDH11Q8TC12 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
RDH11Q8TC12 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
RDH11Q8TC12 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
RDH11Q8TC12 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
RDH11Q8TC12 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC24.4■■□□□ 1.5
RDH11Q8TC12 AL162393.1-201ENST00000437852 946 ntBASIC24.4■■□□□ 1.5
RDH11Q8TC12 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
RDH11Q8TC12 AC020928.2-201ENST00000588717 2197 ntBASIC24.4■■□□□ 1.5
RDH11Q8TC12 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
RDH11Q8TC12 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
RDH11Q8TC12 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC24.4■■□□□ 1.5
RDH11Q8TC12 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
RDH11Q8TC12 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC24.39■■□□□ 1.5
RDH11Q8TC12 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
RDH11Q8TC12 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
RDH11Q8TC12 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
RDH11Q8TC12 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
RDH11Q8TC12 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC24.38■■□□□ 1.49
RDH11Q8TC12 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
RDH11Q8TC12 WHAMMP3-201ENST00000611636 1609 ntBASIC24.37■■□□□ 1.49
RDH11Q8TC12 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
RDH11Q8TC12 NRG1-221ENST00000614767 762 ntTSL 5 BASIC24.37■■□□□ 1.49
RDH11Q8TC12 AC087741.3-201ENST00000624270 1347 ntBASIC24.36■■□□□ 1.49
RDH11Q8TC12 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC24.36■■□□□ 1.49
RDH11Q8TC12 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC24.36■■□□□ 1.49
RDH11Q8TC12 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC24.36■■□□□ 1.49
RDH11Q8TC12 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC24.35■■□□□ 1.49
RDH11Q8TC12 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
RDH11Q8TC12 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
RDH11Q8TC12 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
RDH11Q8TC12 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC24.35■■□□□ 1.49
RDH11Q8TC12 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
RDH11Q8TC12 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
RDH11Q8TC12 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
RDH11Q8TC12 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
RDH11Q8TC12 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC24.34■■□□□ 1.49
RDH11Q8TC12 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
RDH11Q8TC12 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
RDH11Q8TC12 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
RDH11Q8TC12 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
RDH11Q8TC12 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
RDH11Q8TC12 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
RDH11Q8TC12 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
RDH11Q8TC12 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC24.33■■□□□ 1.49
RDH11Q8TC12 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
RDH11Q8TC12 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
RDH11Q8TC12 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC24.32■■□□□ 1.48
RDH11Q8TC12 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC24.31■■□□□ 1.48
RDH11Q8TC12 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC24.31■■□□□ 1.48
RDH11Q8TC12 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
RDH11Q8TC12 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
RDH11Q8TC12 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC24.31■■□□□ 1.48
RDH11Q8TC12 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC24.31■■□□□ 1.48
RDH11Q8TC12 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
RDH11Q8TC12 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC24.3■■□□□ 1.48
RDH11Q8TC12 AC044849.2-201ENST00000606596 710 ntBASIC24.3■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms