Protein–RNA interactions for Protein: Q8TC12

RDH11, Retinol dehydrogenase 11, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11Q8TC12 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
RDH11Q8TC12 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
RDH11Q8TC12 AP004609.3-201ENST00000610705 1884 ntBASIC24.51■■□□□ 1.51
RDH11Q8TC12 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
RDH11Q8TC12 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC24.5■■□□□ 1.51
RDH11Q8TC12 DUSP8P4-201ENST00000399538 1761 ntBASIC24.49■■□□□ 1.51
RDH11Q8TC12 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC24.49■■□□□ 1.51
RDH11Q8TC12 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
RDH11Q8TC12 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
RDH11Q8TC12 AC135731.1-201ENST00000569415 2548 ntBASIC24.49■■□□□ 1.51
RDH11Q8TC12 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
RDH11Q8TC12 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC24.48■■□□□ 1.51
RDH11Q8TC12 AC092803.2-201ENST00000564287 1899 ntBASIC24.48■■□□□ 1.51
RDH11Q8TC12 AP006261.1-201ENST00000584783 668 ntBASIC24.48■■□□□ 1.51
RDH11Q8TC12 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC24.48■■□□□ 1.51
RDH11Q8TC12 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
RDH11Q8TC12 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
RDH11Q8TC12 CIB2-204ENST00000557846 934 ntTSL 3 BASIC24.47■■□□□ 1.51
RDH11Q8TC12 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
RDH11Q8TC12 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
RDH11Q8TC12 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
RDH11Q8TC12 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
RDH11Q8TC12 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC24.45■■□□□ 1.5
RDH11Q8TC12 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC24.45■■□□□ 1.5
RDH11Q8TC12 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC24.45■■□□□ 1.5
RDH11Q8TC12 PEX7-203ENST00000541292 945 ntTSL 5 BASIC24.44■■□□□ 1.5
RDH11Q8TC12 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC24.44■■□□□ 1.5
RDH11Q8TC12 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
RDH11Q8TC12 AC110285.7-201ENST00000624417 1536 ntBASIC24.44■■□□□ 1.5
RDH11Q8TC12 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC24.43■■□□□ 1.5
RDH11Q8TC12 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
RDH11Q8TC12 RPS2P35-201ENST00000443417 897 ntBASIC24.43■■□□□ 1.5
RDH11Q8TC12 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC24.43■■□□□ 1.5
RDH11Q8TC12 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC24.43■■□□□ 1.5
RDH11Q8TC12 AC142472.1-201ENST00000612013 1741 ntBASIC24.42■■□□□ 1.5
RDH11Q8TC12 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC24.42■■□□□ 1.5
RDH11Q8TC12 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
RDH11Q8TC12 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC24.42■■□□□ 1.5
RDH11Q8TC12 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC24.42■■□□□ 1.5
RDH11Q8TC12 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC24.42■■□□□ 1.5
RDH11Q8TC12 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
RDH11Q8TC12 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
RDH11Q8TC12 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
RDH11Q8TC12 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC24.41■■□□□ 1.5
RDH11Q8TC12 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
RDH11Q8TC12 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
RDH11Q8TC12 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
RDH11Q8TC12 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
RDH11Q8TC12 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC24.4■■□□□ 1.5
RDH11Q8TC12 AL162393.1-201ENST00000437852 946 ntBASIC24.4■■□□□ 1.5
RDH11Q8TC12 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
RDH11Q8TC12 AC020928.2-201ENST00000588717 2197 ntBASIC24.4■■□□□ 1.5
RDH11Q8TC12 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
RDH11Q8TC12 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
RDH11Q8TC12 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC24.4■■□□□ 1.5
RDH11Q8TC12 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
RDH11Q8TC12 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC24.39■■□□□ 1.5
RDH11Q8TC12 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
RDH11Q8TC12 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
RDH11Q8TC12 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
RDH11Q8TC12 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
RDH11Q8TC12 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC24.38■■□□□ 1.49
RDH11Q8TC12 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
RDH11Q8TC12 WHAMMP3-201ENST00000611636 1609 ntBASIC24.37■■□□□ 1.49
RDH11Q8TC12 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
RDH11Q8TC12 NRG1-221ENST00000614767 762 ntTSL 5 BASIC24.37■■□□□ 1.49
RDH11Q8TC12 AC087741.3-201ENST00000624270 1347 ntBASIC24.36■■□□□ 1.49
RDH11Q8TC12 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC24.36■■□□□ 1.49
RDH11Q8TC12 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC24.36■■□□□ 1.49
RDH11Q8TC12 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC24.36■■□□□ 1.49
RDH11Q8TC12 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC24.35■■□□□ 1.49
RDH11Q8TC12 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
RDH11Q8TC12 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
RDH11Q8TC12 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
RDH11Q8TC12 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC24.35■■□□□ 1.49
RDH11Q8TC12 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
RDH11Q8TC12 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
RDH11Q8TC12 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
RDH11Q8TC12 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
RDH11Q8TC12 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC24.34■■□□□ 1.49
RDH11Q8TC12 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
RDH11Q8TC12 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
RDH11Q8TC12 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
RDH11Q8TC12 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
RDH11Q8TC12 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
RDH11Q8TC12 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
RDH11Q8TC12 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
RDH11Q8TC12 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC24.33■■□□□ 1.49
RDH11Q8TC12 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
RDH11Q8TC12 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
RDH11Q8TC12 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC24.32■■□□□ 1.48
RDH11Q8TC12 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC24.31■■□□□ 1.48
RDH11Q8TC12 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC24.31■■□□□ 1.48
RDH11Q8TC12 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
RDH11Q8TC12 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
RDH11Q8TC12 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC24.31■■□□□ 1.48
RDH11Q8TC12 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC24.31■■□□□ 1.48
RDH11Q8TC12 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
RDH11Q8TC12 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC24.3■■□□□ 1.48
RDH11Q8TC12 AC044849.2-201ENST00000606596 710 ntBASIC24.3■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 13.5 ms