Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC29.82■■■□□ 2.36
NKX2-3Q8TAU0 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
NKX2-3Q8TAU0 AC018358.1-201ENST00000631079 1402 ntBASIC29.81■■■□□ 2.36
NKX2-3Q8TAU0 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
NKX2-3Q8TAU0 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC29.81■■■□□ 2.36
NKX2-3Q8TAU0 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC29.81■■■□□ 2.36
NKX2-3Q8TAU0 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
NKX2-3Q8TAU0 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC29.79■■■□□ 2.36
NKX2-3Q8TAU0 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
NKX2-3Q8TAU0 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC29.78■■■□□ 2.36
NKX2-3Q8TAU0 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
NKX2-3Q8TAU0 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC29.77■■■□□ 2.36
NKX2-3Q8TAU0 AC022413.1-201ENST00000624602 984 ntBASIC29.77■■■□□ 2.36
NKX2-3Q8TAU0 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
NKX2-3Q8TAU0 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC29.76■■■□□ 2.35
NKX2-3Q8TAU0 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC29.75■■■□□ 2.35
NKX2-3Q8TAU0 CHST11-203ENST00000547956 936 ntTSL 2 BASIC29.75■■■□□ 2.35
NKX2-3Q8TAU0 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC29.75■■■□□ 2.35
NKX2-3Q8TAU0 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC29.75■■■□□ 2.35
NKX2-3Q8TAU0 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC29.75■■■□□ 2.35
NKX2-3Q8TAU0 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
NKX2-3Q8TAU0 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
NKX2-3Q8TAU0 AC142086.6-201ENST00000621154 1765 ntBASIC29.74■■■□□ 2.35
NKX2-3Q8TAU0 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
NKX2-3Q8TAU0 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
NKX2-3Q8TAU0 MIR219A2-201ENST00000608502 1504 ntBASIC29.73■■■□□ 2.35
NKX2-3Q8TAU0 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
NKX2-3Q8TAU0 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC29.73■■■□□ 2.35
NKX2-3Q8TAU0 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
NKX2-3Q8TAU0 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
NKX2-3Q8TAU0 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
NKX2-3Q8TAU0 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC29.72■■■□□ 2.35
NKX2-3Q8TAU0 AL033527.3-201ENST00000566366 1196 ntBASIC29.72■■■□□ 2.35
NKX2-3Q8TAU0 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC29.72■■■□□ 2.35
NKX2-3Q8TAU0 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC29.72■■■□□ 2.35
NKX2-3Q8TAU0 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
NKX2-3Q8TAU0 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC29.7■■■□□ 2.35
NKX2-3Q8TAU0 AC008813.1-201ENST00000536597 885 ntBASIC29.7■■■□□ 2.35
NKX2-3Q8TAU0 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC29.7■■■□□ 2.35
NKX2-3Q8TAU0 AC148477.6-201ENST00000623746 465 ntBASIC29.7■■■□□ 2.35
NKX2-3Q8TAU0 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
NKX2-3Q8TAU0 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC29.7■■■□□ 2.34
NKX2-3Q8TAU0 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC29.69■■■□□ 2.34
NKX2-3Q8TAU0 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC29.69■■■□□ 2.34
NKX2-3Q8TAU0 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC29.69■■■□□ 2.34
NKX2-3Q8TAU0 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
NKX2-3Q8TAU0 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC29.69■■■□□ 2.34
NKX2-3Q8TAU0 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC29.68■■■□□ 2.34
NKX2-3Q8TAU0 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC29.68■■■□□ 2.34
NKX2-3Q8TAU0 MED25-210ENST00000612854 801 ntTSL 5 BASIC29.68■■■□□ 2.34
NKX2-3Q8TAU0 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
NKX2-3Q8TAU0 MED25-214ENST00000622402 642 ntTSL 5 BASIC29.68■■■□□ 2.34
NKX2-3Q8TAU0 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
NKX2-3Q8TAU0 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
NKX2-3Q8TAU0 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
NKX2-3Q8TAU0 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
NKX2-3Q8TAU0 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
NKX2-3Q8TAU0 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC29.65■■■□□ 2.34
NKX2-3Q8TAU0 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
NKX2-3Q8TAU0 LINC01003-201ENST00000564834 1764 ntBASIC29.65■■■□□ 2.34
NKX2-3Q8TAU0 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
NKX2-3Q8TAU0 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
NKX2-3Q8TAU0 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC29.65■■■□□ 2.34
NKX2-3Q8TAU0 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC29.65■■■□□ 2.34
NKX2-3Q8TAU0 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC29.64■■■□□ 2.34
NKX2-3Q8TAU0 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
NKX2-3Q8TAU0 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
NKX2-3Q8TAU0 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC29.64■■■□□ 2.34
NKX2-3Q8TAU0 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC29.64■■■□□ 2.34
NKX2-3Q8TAU0 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
NKX2-3Q8TAU0 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC29.63■■■□□ 2.33
NKX2-3Q8TAU0 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
NKX2-3Q8TAU0 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC29.63■■■□□ 2.33
NKX2-3Q8TAU0 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC29.63■■■□□ 2.33
NKX2-3Q8TAU0 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC29.62■■■□□ 2.33
NKX2-3Q8TAU0 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
NKX2-3Q8TAU0 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC29.61■■■□□ 2.33
NKX2-3Q8TAU0 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC29.61■■■□□ 2.33
NKX2-3Q8TAU0 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
NKX2-3Q8TAU0 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC29.6■■■□□ 2.33
NKX2-3Q8TAU0 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC29.59■■■□□ 2.33
NKX2-3Q8TAU0 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
NKX2-3Q8TAU0 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC29.59■■■□□ 2.33
NKX2-3Q8TAU0 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
NKX2-3Q8TAU0 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
NKX2-3Q8TAU0 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
NKX2-3Q8TAU0 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC29.58■■■□□ 2.33
NKX2-3Q8TAU0 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
NKX2-3Q8TAU0 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC29.58■■■□□ 2.33
NKX2-3Q8TAU0 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC29.58■■■□□ 2.33
NKX2-3Q8TAU0 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC29.57■■■□□ 2.32
NKX2-3Q8TAU0 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
NKX2-3Q8TAU0 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC29.57■■■□□ 2.32
NKX2-3Q8TAU0 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
NKX2-3Q8TAU0 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
NKX2-3Q8TAU0 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC29.56■■■□□ 2.32
NKX2-3Q8TAU0 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
NKX2-3Q8TAU0 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
NKX2-3Q8TAU0 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC29.55■■■□□ 2.32
NKX2-3Q8TAU0 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms