Protein–RNA interactions for Protein: Q8NDX1

PSD4, PH and SEC7 domain-containing protein 4, humanhuman

Predictions only

Length 1,056 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSD4Q8NDX1 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
PSD4Q8NDX1 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PSD4Q8NDX1 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC23.31■■□□□ 1.32
PSD4Q8NDX1 AL121749.1-202ENST00000609313 2153 ntBASIC23.3■■□□□ 1.32
PSD4Q8NDX1 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PSD4Q8NDX1 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC23.3■■□□□ 1.32
PSD4Q8NDX1 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC23.3■■□□□ 1.32
PSD4Q8NDX1 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
PSD4Q8NDX1 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PSD4Q8NDX1 AC100797.4-201ENST00000631653 1827 ntBASIC23.29■■□□□ 1.32
PSD4Q8NDX1 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
PSD4Q8NDX1 TPT1-202ENST00000379055 948 ntTSL 2 BASIC23.29■■□□□ 1.32
PSD4Q8NDX1 RPS2-210ENST00000530225 765 ntTSL 2 BASIC23.29■■□□□ 1.32
PSD4Q8NDX1 PEX7-203ENST00000541292 945 ntTSL 5 BASIC23.29■■□□□ 1.32
PSD4Q8NDX1 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PSD4Q8NDX1 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
PSD4Q8NDX1 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
PSD4Q8NDX1 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PSD4Q8NDX1 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC23.27■■□□□ 1.32
PSD4Q8NDX1 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
PSD4Q8NDX1 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC23.27■■□□□ 1.32
PSD4Q8NDX1 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC23.27■■□□□ 1.31
PSD4Q8NDX1 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PSD4Q8NDX1 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC23.26■■□□□ 1.31
PSD4Q8NDX1 CHST11-203ENST00000547956 936 ntTSL 2 BASIC23.26■■□□□ 1.31
PSD4Q8NDX1 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PSD4Q8NDX1 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PSD4Q8NDX1 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
PSD4Q8NDX1 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC23.25■■□□□ 1.31
PSD4Q8NDX1 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
PSD4Q8NDX1 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
PSD4Q8NDX1 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PSD4Q8NDX1 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC23.24■■□□□ 1.31
PSD4Q8NDX1 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
PSD4Q8NDX1 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC23.24■■□□□ 1.31
PSD4Q8NDX1 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PSD4Q8NDX1 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
PSD4Q8NDX1 AC148477.6-201ENST00000623746 465 ntBASIC23.24■■□□□ 1.31
PSD4Q8NDX1 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
PSD4Q8NDX1 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
PSD4Q8NDX1 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
PSD4Q8NDX1 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
PSD4Q8NDX1 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
PSD4Q8NDX1 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC23.23■■□□□ 1.31
PSD4Q8NDX1 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC23.23■■□□□ 1.31
PSD4Q8NDX1 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC23.23■■□□□ 1.31
PSD4Q8NDX1 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
PSD4Q8NDX1 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PSD4Q8NDX1 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PSD4Q8NDX1 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
PSD4Q8NDX1 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PSD4Q8NDX1 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PSD4Q8NDX1 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC23.22■■□□□ 1.31
PSD4Q8NDX1 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC23.22■■□□□ 1.31
PSD4Q8NDX1 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC23.22■■□□□ 1.31
PSD4Q8NDX1 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
PSD4Q8NDX1 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PSD4Q8NDX1 BRD4-212ENST00000630599 726 ntTSL 2 BASIC23.21■■□□□ 1.31
PSD4Q8NDX1 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC23.21■■□□□ 1.31
PSD4Q8NDX1 CREM-210ENST00000374721 2020 ntTSL 5 BASIC23.21■■□□□ 1.31
PSD4Q8NDX1 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PSD4Q8NDX1 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PSD4Q8NDX1 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PSD4Q8NDX1 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC23.2■■□□□ 1.3
PSD4Q8NDX1 SHF-207ENST00000560540 2062 ntTSL 5 BASIC23.2■■□□□ 1.3
PSD4Q8NDX1 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PSD4Q8NDX1 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
PSD4Q8NDX1 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PSD4Q8NDX1 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
PSD4Q8NDX1 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
PSD4Q8NDX1 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC23.19■■□□□ 1.3
PSD4Q8NDX1 MIR219A2-201ENST00000608502 1504 ntBASIC23.18■■□□□ 1.3
PSD4Q8NDX1 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
PSD4Q8NDX1 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PSD4Q8NDX1 GPX1-201ENST00000419349 1106 ntBASIC23.18■■□□□ 1.3
PSD4Q8NDX1 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC23.18■■□□□ 1.3
PSD4Q8NDX1 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
PSD4Q8NDX1 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC23.18■■□□□ 1.3
PSD4Q8NDX1 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC23.18■■□□□ 1.3
PSD4Q8NDX1 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
PSD4Q8NDX1 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PSD4Q8NDX1 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PSD4Q8NDX1 CEP120-209ENST00000515110 606 ntTSL 3 BASIC23.17■■□□□ 1.3
PSD4Q8NDX1 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PSD4Q8NDX1 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PSD4Q8NDX1 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PSD4Q8NDX1 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
PSD4Q8NDX1 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PSD4Q8NDX1 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC23.15■■□□□ 1.3
PSD4Q8NDX1 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC23.15■■□□□ 1.3
PSD4Q8NDX1 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC23.15■■□□□ 1.3
PSD4Q8NDX1 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PSD4Q8NDX1 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
PSD4Q8NDX1 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
PSD4Q8NDX1 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PSD4Q8NDX1 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC23.15■■□□□ 1.3
PSD4Q8NDX1 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
PSD4Q8NDX1 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
PSD4Q8NDX1 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC23.14■■□□□ 1.3
PSD4Q8NDX1 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms