Protein–RNA interactions for Protein: Q8NCS7

SLC44A5, Choline transporter-like protein 5, humanhuman

Predictions only

Length 719 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A5Q8NCS7 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
SLC44A5Q8NCS7 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC29.66■■■□□ 2.34
SLC44A5Q8NCS7 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC29.66■■■□□ 2.34
SLC44A5Q8NCS7 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC29.66■■■□□ 2.34
SLC44A5Q8NCS7 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
SLC44A5Q8NCS7 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC29.66■■■□□ 2.34
SLC44A5Q8NCS7 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC29.65■■■□□ 2.34
SLC44A5Q8NCS7 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC29.65■■■□□ 2.34
SLC44A5Q8NCS7 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
SLC44A5Q8NCS7 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC29.64■■■□□ 2.34
SLC44A5Q8NCS7 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
SLC44A5Q8NCS7 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
SLC44A5Q8NCS7 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC29.63■■■□□ 2.33
SLC44A5Q8NCS7 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
SLC44A5Q8NCS7 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
SLC44A5Q8NCS7 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
SLC44A5Q8NCS7 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
SLC44A5Q8NCS7 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
SLC44A5Q8NCS7 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
SLC44A5Q8NCS7 AL359258.2-201ENST00000564063 1566 ntBASIC29.61■■■□□ 2.33
SLC44A5Q8NCS7 DRD5P2-201ENST00000421395 2012 ntBASIC29.61■■■□□ 2.33
SLC44A5Q8NCS7 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
SLC44A5Q8NCS7 AC126177.7-201ENST00000547904 679 ntBASIC29.61■■■□□ 2.33
SLC44A5Q8NCS7 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
SLC44A5Q8NCS7 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
SLC44A5Q8NCS7 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC29.61■■■□□ 2.33
SLC44A5Q8NCS7 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
SLC44A5Q8NCS7 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
SLC44A5Q8NCS7 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
SLC44A5Q8NCS7 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC29.59■■■□□ 2.33
SLC44A5Q8NCS7 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC29.59■■■□□ 2.33
SLC44A5Q8NCS7 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC29.59■■■□□ 2.33
SLC44A5Q8NCS7 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
SLC44A5Q8NCS7 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC29.58■■■□□ 2.33
SLC44A5Q8NCS7 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC29.57■■■□□ 2.32
SLC44A5Q8NCS7 AC018358.1-201ENST00000631079 1402 ntBASIC29.57■■■□□ 2.32
SLC44A5Q8NCS7 ECEL1P2-201ENST00000461596 1295 ntBASIC29.57■■■□□ 2.32
SLC44A5Q8NCS7 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC29.56■■■□□ 2.32
SLC44A5Q8NCS7 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
SLC44A5Q8NCS7 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC29.56■■■□□ 2.32
SLC44A5Q8NCS7 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC29.55■■■□□ 2.32
SLC44A5Q8NCS7 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
SLC44A5Q8NCS7 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC29.55■■■□□ 2.32
SLC44A5Q8NCS7 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC29.55■■■□□ 2.32
SLC44A5Q8NCS7 NTF6A-201ENST00000591175 560 ntBASIC29.55■■■□□ 2.32
SLC44A5Q8NCS7 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
SLC44A5Q8NCS7 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC29.55■■■□□ 2.32
SLC44A5Q8NCS7 HYI-213ENST00000583037 1322 ntTSL 5 BASIC29.54■■■□□ 2.32
SLC44A5Q8NCS7 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC29.54■■■□□ 2.32
SLC44A5Q8NCS7 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC29.54■■■□□ 2.32
SLC44A5Q8NCS7 U85056.1-201ENST00000616429 682 ntBASIC29.54■■■□□ 2.32
SLC44A5Q8NCS7 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
SLC44A5Q8NCS7 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
SLC44A5Q8NCS7 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC29.53■■■□□ 2.32
SLC44A5Q8NCS7 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
SLC44A5Q8NCS7 PROC-203ENST00000409048 1586 ntTSL 5 BASIC29.52■■■□□ 2.32
SLC44A5Q8NCS7 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
SLC44A5Q8NCS7 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC29.52■■■□□ 2.32
SLC44A5Q8NCS7 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC29.52■■■□□ 2.32
SLC44A5Q8NCS7 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
SLC44A5Q8NCS7 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC29.51■■■□□ 2.31
SLC44A5Q8NCS7 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC29.51■■■□□ 2.31
SLC44A5Q8NCS7 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC29.51■■■□□ 2.31
SLC44A5Q8NCS7 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC29.51■■■□□ 2.31
SLC44A5Q8NCS7 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC29.5■■■□□ 2.31
SLC44A5Q8NCS7 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
SLC44A5Q8NCS7 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC29.49■■■□□ 2.31
SLC44A5Q8NCS7 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
SLC44A5Q8NCS7 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC29.48■■■□□ 2.31
SLC44A5Q8NCS7 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC29.48■■■□□ 2.31
SLC44A5Q8NCS7 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC29.48■■■□□ 2.31
SLC44A5Q8NCS7 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
SLC44A5Q8NCS7 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
SLC44A5Q8NCS7 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC29.46■■■□□ 2.31
SLC44A5Q8NCS7 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC29.45■■■□□ 2.31
SLC44A5Q8NCS7 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
SLC44A5Q8NCS7 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
SLC44A5Q8NCS7 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC29.45■■■□□ 2.3
SLC44A5Q8NCS7 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
SLC44A5Q8NCS7 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
SLC44A5Q8NCS7 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC29.44■■■□□ 2.3
SLC44A5Q8NCS7 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC29.43■■■□□ 2.3
SLC44A5Q8NCS7 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
SLC44A5Q8NCS7 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC29.42■■■□□ 2.3
SLC44A5Q8NCS7 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
SLC44A5Q8NCS7 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
SLC44A5Q8NCS7 AC007029.1-201ENST00000604183 313 ntBASIC29.41■■■□□ 2.3
SLC44A5Q8NCS7 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC29.4■■■□□ 2.3
SLC44A5Q8NCS7 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
SLC44A5Q8NCS7 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC29.39■■■□□ 2.3
SLC44A5Q8NCS7 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC29.39■■■□□ 2.29
SLC44A5Q8NCS7 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
SLC44A5Q8NCS7 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
SLC44A5Q8NCS7 SMPD5-203ENST00000639008 1464 ntBASIC29.38■■■□□ 2.29
SLC44A5Q8NCS7 KRT18P60-201ENST00000312876 1297 ntBASIC29.38■■■□□ 2.29
SLC44A5Q8NCS7 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
SLC44A5Q8NCS7 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC29.38■■■□□ 2.29
SLC44A5Q8NCS7 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
SLC44A5Q8NCS7 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC29.37■■■□□ 2.29
SLC44A5Q8NCS7 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms