Protein–RNA interactions for Protein: Q8IWL2

SFTPA1, Pulmonary surfactant-associated protein A1, humanhuman

Predictions only

Length 248 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPA1Q8IWL2 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
SFTPA1Q8IWL2 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
SFTPA1Q8IWL2 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC25.56■■□□□ 1.68
SFTPA1Q8IWL2 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
SFTPA1Q8IWL2 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC25.56■■□□□ 1.68
SFTPA1Q8IWL2 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC25.55■■□□□ 1.68
SFTPA1Q8IWL2 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
SFTPA1Q8IWL2 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC25.55■■□□□ 1.68
SFTPA1Q8IWL2 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC25.55■■□□□ 1.68
SFTPA1Q8IWL2 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
SFTPA1Q8IWL2 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
SFTPA1Q8IWL2 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
SFTPA1Q8IWL2 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC25.54■■□□□ 1.68
SFTPA1Q8IWL2 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
SFTPA1Q8IWL2 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
SFTPA1Q8IWL2 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC25.54■■□□□ 1.68
SFTPA1Q8IWL2 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
SFTPA1Q8IWL2 AC009831.1-201ENST00000580420 1582 ntBASIC25.53■■□□□ 1.68
SFTPA1Q8IWL2 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC25.53■■□□□ 1.68
SFTPA1Q8IWL2 ST7-202ENST00000323984 2142 ntTSL 5 BASIC25.52■■□□□ 1.68
SFTPA1Q8IWL2 ST7-207ENST00000393449 2127 ntTSL 5 BASIC25.52■■□□□ 1.68
SFTPA1Q8IWL2 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
SFTPA1Q8IWL2 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC25.52■■□□□ 1.68
SFTPA1Q8IWL2 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
SFTPA1Q8IWL2 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
SFTPA1Q8IWL2 GUK1-208ENST00000366728 842 ntTSL 2 BASIC25.52■■□□□ 1.68
SFTPA1Q8IWL2 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
SFTPA1Q8IWL2 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
SFTPA1Q8IWL2 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC25.52■■□□□ 1.68
SFTPA1Q8IWL2 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC25.52■■□□□ 1.68
SFTPA1Q8IWL2 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC25.52■■□□□ 1.68
SFTPA1Q8IWL2 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC25.51■■□□□ 1.67
SFTPA1Q8IWL2 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
SFTPA1Q8IWL2 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
SFTPA1Q8IWL2 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
SFTPA1Q8IWL2 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
SFTPA1Q8IWL2 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC25.5■■□□□ 1.67
SFTPA1Q8IWL2 SMPD5-203ENST00000639008 1464 ntBASIC25.5■■□□□ 1.67
SFTPA1Q8IWL2 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
SFTPA1Q8IWL2 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC25.49■■□□□ 1.67
SFTPA1Q8IWL2 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
SFTPA1Q8IWL2 AL592293.1-201ENST00000502889 1188 ntBASIC25.49■■□□□ 1.67
SFTPA1Q8IWL2 AP002414.2-202ENST00000590929 1450 ntBASIC25.48■■□□□ 1.67
SFTPA1Q8IWL2 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
SFTPA1Q8IWL2 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
SFTPA1Q8IWL2 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC25.48■■□□□ 1.67
SFTPA1Q8IWL2 AC129492.7-201ENST00000622992 756 ntBASIC25.48■■□□□ 1.67
SFTPA1Q8IWL2 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
SFTPA1Q8IWL2 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC25.47■■□□□ 1.67
SFTPA1Q8IWL2 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC25.47■■□□□ 1.67
SFTPA1Q8IWL2 DUX4L18-201ENST00000553347 1267 ntBASIC25.47■■□□□ 1.67
SFTPA1Q8IWL2 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC25.47■■□□□ 1.67
SFTPA1Q8IWL2 AC133552.2-201ENST00000619106 1032 ntBASIC25.47■■□□□ 1.67
SFTPA1Q8IWL2 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
SFTPA1Q8IWL2 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
SFTPA1Q8IWL2 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
SFTPA1Q8IWL2 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC25.46■■□□□ 1.67
SFTPA1Q8IWL2 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
SFTPA1Q8IWL2 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
SFTPA1Q8IWL2 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC25.46■■□□□ 1.67
SFTPA1Q8IWL2 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
SFTPA1Q8IWL2 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC25.46■■□□□ 1.67
SFTPA1Q8IWL2 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
SFTPA1Q8IWL2 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
SFTPA1Q8IWL2 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC25.45■■□□□ 1.66
SFTPA1Q8IWL2 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC25.45■■□□□ 1.66
SFTPA1Q8IWL2 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC25.45■■□□□ 1.66
SFTPA1Q8IWL2 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
SFTPA1Q8IWL2 REST-210ENST00000638187 1334 ntTSL 5 BASIC25.44■■□□□ 1.66
SFTPA1Q8IWL2 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC25.44■■□□□ 1.66
SFTPA1Q8IWL2 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC25.44■■□□□ 1.66
SFTPA1Q8IWL2 AC025884.2-201ENST00000553429 711 ntBASIC25.44■■□□□ 1.66
SFTPA1Q8IWL2 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC25.44■■□□□ 1.66
SFTPA1Q8IWL2 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC25.43■■□□□ 1.66
SFTPA1Q8IWL2 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC25.43■■□□□ 1.66
SFTPA1Q8IWL2 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC25.43■■□□□ 1.66
SFTPA1Q8IWL2 AC026202.3-201ENST00000600805 1127 ntBASIC25.43■■□□□ 1.66
SFTPA1Q8IWL2 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC25.43■■□□□ 1.66
SFTPA1Q8IWL2 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC25.43■■□□□ 1.66
SFTPA1Q8IWL2 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC25.42■■□□□ 1.66
SFTPA1Q8IWL2 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
SFTPA1Q8IWL2 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
SFTPA1Q8IWL2 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
SFTPA1Q8IWL2 RARRES2P1-201ENST00000474487 481 ntBASIC25.41■■□□□ 1.66
SFTPA1Q8IWL2 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
SFTPA1Q8IWL2 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
SFTPA1Q8IWL2 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
SFTPA1Q8IWL2 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC25.4■■□□□ 1.66
SFTPA1Q8IWL2 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC25.4■■□□□ 1.66
SFTPA1Q8IWL2 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
SFTPA1Q8IWL2 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
SFTPA1Q8IWL2 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.66
SFTPA1Q8IWL2 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.66
SFTPA1Q8IWL2 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC25.38■■□□□ 1.65
SFTPA1Q8IWL2 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC25.38■■□□□ 1.65
SFTPA1Q8IWL2 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC25.38■■□□□ 1.65
SFTPA1Q8IWL2 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC25.38■■□□□ 1.65
SFTPA1Q8IWL2 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC25.38■■□□□ 1.65
SFTPA1Q8IWL2 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC25.38■■□□□ 1.65
SFTPA1Q8IWL2 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC25.37■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms