Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 MLEC-202ENST00000412616 841 ntTSL 3 BASIC24.71■■□□□ 1.55
CRLF3Q8IUI8 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
CRLF3Q8IUI8 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
CRLF3Q8IUI8 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
CRLF3Q8IUI8 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
CRLF3Q8IUI8 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
CRLF3Q8IUI8 ABHD17AP4-201ENST00000411545 909 ntBASIC24.7■■□□□ 1.54
CRLF3Q8IUI8 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
CRLF3Q8IUI8 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC24.7■■□□□ 1.54
CRLF3Q8IUI8 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
CRLF3Q8IUI8 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
CRLF3Q8IUI8 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
CRLF3Q8IUI8 MEST-211ENST00000437945 1455 ntTSL 5 BASIC24.69■■□□□ 1.54
CRLF3Q8IUI8 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC24.68■■□□□ 1.54
CRLF3Q8IUI8 AC020928.2-201ENST00000588717 2197 ntBASIC24.68■■□□□ 1.54
CRLF3Q8IUI8 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC24.67■■□□□ 1.54
CRLF3Q8IUI8 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC24.67■■□□□ 1.54
CRLF3Q8IUI8 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC24.67■■□□□ 1.54
CRLF3Q8IUI8 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC24.66■■□□□ 1.54
CRLF3Q8IUI8 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC24.66■■□□□ 1.54
CRLF3Q8IUI8 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CRLF3Q8IUI8 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC24.66■■□□□ 1.54
CRLF3Q8IUI8 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC24.66■■□□□ 1.54
CRLF3Q8IUI8 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC24.66■■□□□ 1.54
CRLF3Q8IUI8 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC24.66■■□□□ 1.54
CRLF3Q8IUI8 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC24.65■■□□□ 1.54
CRLF3Q8IUI8 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC24.65■■□□□ 1.54
CRLF3Q8IUI8 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
CRLF3Q8IUI8 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
CRLF3Q8IUI8 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC24.64■■□□□ 1.54
CRLF3Q8IUI8 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC24.64■■□□□ 1.54
CRLF3Q8IUI8 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC24.64■■□□□ 1.53
CRLF3Q8IUI8 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
CRLF3Q8IUI8 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
CRLF3Q8IUI8 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC24.64■■□□□ 1.53
CRLF3Q8IUI8 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC24.64■■□□□ 1.53
CRLF3Q8IUI8 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC24.63■■□□□ 1.53
CRLF3Q8IUI8 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC24.63■■□□□ 1.53
CRLF3Q8IUI8 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
CRLF3Q8IUI8 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
CRLF3Q8IUI8 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
CRLF3Q8IUI8 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC24.63■■□□□ 1.53
CRLF3Q8IUI8 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
CRLF3Q8IUI8 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC24.62■■□□□ 1.53
CRLF3Q8IUI8 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC24.62■■□□□ 1.53
CRLF3Q8IUI8 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CRLF3Q8IUI8 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC24.62■■□□□ 1.53
CRLF3Q8IUI8 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC24.62■■□□□ 1.53
CRLF3Q8IUI8 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CRLF3Q8IUI8 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CRLF3Q8IUI8 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CRLF3Q8IUI8 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CRLF3Q8IUI8 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CRLF3Q8IUI8 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
CRLF3Q8IUI8 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC24.61■■□□□ 1.53
CRLF3Q8IUI8 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC24.61■■□□□ 1.53
CRLF3Q8IUI8 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
CRLF3Q8IUI8 PKM-204ENST00000449901 2526 ntTSL 2 BASIC24.6■■□□□ 1.53
CRLF3Q8IUI8 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
CRLF3Q8IUI8 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
CRLF3Q8IUI8 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
CRLF3Q8IUI8 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC24.59■■□□□ 1.53
CRLF3Q8IUI8 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC24.59■■□□□ 1.53
CRLF3Q8IUI8 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
CRLF3Q8IUI8 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
CRLF3Q8IUI8 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC24.59■■□□□ 1.53
CRLF3Q8IUI8 MIR7108-201ENST00000614319 87 ntBASIC24.59■■□□□ 1.53
CRLF3Q8IUI8 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC24.59■■□□□ 1.53
CRLF3Q8IUI8 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
CRLF3Q8IUI8 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC24.58■■□□□ 1.53
CRLF3Q8IUI8 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
CRLF3Q8IUI8 AC108673.1-201ENST00000510422 1159 ntBASIC24.58■■□□□ 1.53
CRLF3Q8IUI8 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC24.57■■□□□ 1.52
CRLF3Q8IUI8 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
CRLF3Q8IUI8 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC24.57■■□□□ 1.52
CRLF3Q8IUI8 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC24.57■■□□□ 1.52
CRLF3Q8IUI8 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
CRLF3Q8IUI8 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
CRLF3Q8IUI8 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC24.56■■□□□ 1.52
CRLF3Q8IUI8 MIR6090-201ENST00000622481 60 ntBASIC24.56■■□□□ 1.52
CRLF3Q8IUI8 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
CRLF3Q8IUI8 AC135983.2-203ENST00000454486 1613 ntBASIC24.56■■□□□ 1.52
CRLF3Q8IUI8 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
CRLF3Q8IUI8 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC24.56■■□□□ 1.52
CRLF3Q8IUI8 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
CRLF3Q8IUI8 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
CRLF3Q8IUI8 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC24.55■■□□□ 1.52
CRLF3Q8IUI8 HGH1-207ENST00000628266 258 ntTSL 5 BASIC24.55■■□□□ 1.52
CRLF3Q8IUI8 DUSP8P4-201ENST00000399538 1761 ntBASIC24.54■■□□□ 1.52
CRLF3Q8IUI8 CIB2-204ENST00000557846 934 ntTSL 3 BASIC24.54■■□□□ 1.52
CRLF3Q8IUI8 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC24.54■■□□□ 1.52
CRLF3Q8IUI8 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC24.54■■□□□ 1.52
CRLF3Q8IUI8 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
CRLF3Q8IUI8 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC24.53■■□□□ 1.52
CRLF3Q8IUI8 DUX4L29-201ENST00000425409 679 ntBASIC24.53■■□□□ 1.52
CRLF3Q8IUI8 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC24.53■■□□□ 1.52
CRLF3Q8IUI8 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
CRLF3Q8IUI8 AC092803.2-201ENST00000564287 1899 ntBASIC24.52■■□□□ 1.52
CRLF3Q8IUI8 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
CRLF3Q8IUI8 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms